46 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_03939	TFIIE beta domain-containing protein. (232 aa)
	Z520_06303	Uncharacterized protein. (341 aa)
	Z520_06682	RING-type domain-containing protein. (270 aa)
	Z520_06916	Uncharacterized protein. (633 aa)
	Z520_05808	RPOL9 domain-containing protein. (111 aa)
	Z520_08801	Uncharacterized protein. (78 aa)
	Z520_09504	Uncharacterized protein. (345 aa)
	Z520_07091	Uncharacterized protein. (497 aa)
	Z520_07547	Uncharacterized protein. (1235 aa)
	Z520_01007	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (523 aa)
	Z520_02769	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (243 aa)
	Z520_05597	DUF3591 domain-containing protein. (1112 aa)
	Z520_06336	Uncharacterized protein. (220 aa)
	Z520_07832	Uncharacterized protein. (720 aa)
	Z520_08281	RNA_pol_L_2 domain-containing protein. (270 aa)
	Z520_09862	WD_REPEATS_REGION domain-containing protein. (407 aa)
	Z520_09807	Uncharacterized protein. (75 aa)
	Z520_10516	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (421 aa)
	Z520_11208	TAFII55_N domain-containing protein. (852 aa)
	Z520_11801	TAFII28 domain-containing protein. (355 aa)
	Z520_00868	Uncharacterized protein. (527 aa)
	Z520_01201	Uncharacterized protein. (420 aa)
	Z520_02049	Uncharacterized protein. (253 aa)
	Z520_03361	CDC73_C domain-containing protein. (445 aa)
	Z520_04151	HTH TFE/IIEalpha-type domain-containing protein. (347 aa)
	Z520_05066	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (468 aa)
	Z520_05456	Acyl_transf_3 domain-containing protein. (474 aa)
	Z520_06747	Uncharacterized protein. (561 aa)
	Z520_07384	CYCLIN domain-containing protein; Belongs to the cyclin family. (387 aa)
	Z520_11207	BTP domain-containing protein. (233 aa)
	Z520_04333	CYCLIN domain-containing protein; Belongs to the cyclin family. (378 aa)
	Z520_03212	Uncharacterized protein. (549 aa)
	Z520_03374	Uncharacterized protein. (1298 aa)
	Z520_01872	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	Z520_02107	Uncharacterized protein. (270 aa)
	Z520_01751	TAF8_C domain-containing protein. (307 aa)
	Z520_00877	DUF4211 domain-containing protein. (714 aa)
	Z520_00556	RPOLD domain-containing protein. (338 aa)
	Z520_01175	Plus3 domain-containing protein. (616 aa)
	Z520_09699	TFIID_20kDa domain-containing protein. (580 aa)
	Z520_00329	Uncharacterized protein. (628 aa)
	Z520_11326	Uncharacterized protein. (385 aa)
	Z520_05000	WD_REPEATS_REGION domain-containing protein. (805 aa)
	Z520_01871	Uncharacterized protein. (354 aa)
	Z520_05950	Uncharacterized protein. (846 aa)
	Z520_05850	TAF domain-containing protein. (450 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_00329	Z520_00556	A0A0D2KBZ3	A0A0D2KK84	Uncharacterized protein.	RPOLD domain-containing protein.	0.928
Z520_00329	Z520_01175	A0A0D2KBZ3	A0A0D2KGV7	Uncharacterized protein.	Plus3 domain-containing protein.	0.966
Z520_00329	Z520_03361	A0A0D2KBZ3	A0A0D2HFH9	Uncharacterized protein.	CDC73_C domain-containing protein.	0.975
Z520_00329	Z520_05808	A0A0D2KBZ3	A0A0D2JYA0	Uncharacterized protein.	RPOL9 domain-containing protein.	0.829
Z520_00329	Z520_07091	A0A0D2KBZ3	A0A0D2JU13	Uncharacterized protein.	Uncharacterized protein.	0.999
Z520_00329	Z520_07547	A0A0D2KBZ3	A0A0D2JTK6	Uncharacterized protein.	Uncharacterized protein.	0.978
Z520_00329	Z520_08281	A0A0D2KBZ3	A0A0D2IG41	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.795
Z520_00329	Z520_09807	A0A0D2KBZ3	A0A0D2IBB2	Uncharacterized protein.	Uncharacterized protein.	0.829
Z520_00329	Z520_09862	A0A0D2KBZ3	A0A0D2IBF7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.596
Z520_00329	Z520_11326	A0A0D2KBZ3	A0A0D2K9H9	Uncharacterized protein.	Uncharacterized protein.	0.565
Z520_00556	Z520_00329	A0A0D2KK84	A0A0D2KBZ3	RPOLD domain-containing protein.	Uncharacterized protein.	0.928
Z520_00556	Z520_00868	A0A0D2KK84	A0A0D2HQP3	RPOLD domain-containing protein.	Uncharacterized protein.	0.976
Z520_00556	Z520_00877	A0A0D2KK84	A0A0D2KL15	RPOLD domain-containing protein.	DUF4211 domain-containing protein.	0.824
Z520_00556	Z520_01007	A0A0D2KK84	A0A0D2IZN8	RPOLD domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.972
Z520_00556	Z520_01175	A0A0D2KK84	A0A0D2KGV7	RPOLD domain-containing protein.	Plus3 domain-containing protein.	0.936
Z520_00556	Z520_01751	A0A0D2KK84	A0A0D2L2L9	RPOLD domain-containing protein.	TAF8_C domain-containing protein.	0.877
Z520_00556	Z520_01871	A0A0D2KK84	A0A0D2K717	RPOLD domain-containing protein.	Uncharacterized protein.	0.942
Z520_00556	Z520_01872	A0A0D2KK84	A0A0D2KY21	RPOLD domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.942
Z520_00556	Z520_02107	A0A0D2KK84	A0A0D2KYT4	RPOLD domain-containing protein.	Uncharacterized protein.	0.873
Z520_00556	Z520_02769	A0A0D2KK84	A0A0D2IVY6	RPOLD domain-containing protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.897