(92 nodes) Phenylalanine metabolism network (Fonsecaea multimorphosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_00847	Amidase domain-containing protein. (556 aa)
	Z520_00786	Amidase domain-containing protein. (711 aa)
	Z520_01455	Amidase domain-containing protein. (550 aa)
	Z520_02661	AP_endonuc_2 domain-containing protein. (340 aa)
	Z520_03725	Amidase domain-containing protein. (560 aa)
	Z520_03705	Amidase domain-containing protein. (542 aa)
	Z520_05334	Amidase domain-containing protein. (539 aa)
	Z520_05579	Phenylalanine ammonia-lyase. (941 aa)
	Z520_11770	Zn(2)-C6 fungal-type domain-containing protein. (656 aa)
	Z520_11228	Aminotran_1_2 domain-containing protein. (623 aa)
	Z520_10357	Uncharacterized protein; Belongs to the cytochrome P450 family. (515 aa)
	Z520_10040	Amidase domain-containing protein. (562 aa)
	Z520_09126	Amine oxidase. (497 aa)
	Z520_08635	N-acetyltransferase domain-containing protein. (193 aa)
	Z520_07184	Uncharacterized protein. (520 aa)
	Z520_06043	Amine oxidase. (683 aa)
	Z520_06059	Uncharacterized protein. (294 aa)
	Z520_06165	Amine oxidase. (472 aa)
	Z520_05196	Amidase domain-containing protein. (548 aa)
	Z520_05466	Uncharacterized protein. (283 aa)
	Z520_04016	AP_endonuc_2 domain-containing protein. (360 aa)
	Z520_02304	Amine oxidase. (631 aa)
	Z520_01583	Amino_oxidase domain-containing protein. (733 aa)
	Z520_01623	AAA domain-containing protein. (834 aa)
	Z520_12262	Uncharacterized protein. (522 aa)
	Z520_11528	Aminotran_1_2 domain-containing protein. (456 aa)
	Z520_11608	Uncharacterized protein. (566 aa)
	Z520_09802	SurE domain-containing protein. (349 aa)
	Z520_09082	Zn(2)-C6 fungal-type domain-containing protein. (649 aa)
	katG	Catalase-peroxidase; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (755 aa)
	Z520_08306	Aminotran_1_2 domain-containing protein. (410 aa)
	Z520_07070	Zn(2)-C6 fungal-type domain-containing protein. (689 aa)
	Z520_04787	Amine oxidase. (624 aa)
	Z520_04397	Aminotran_1_2 domain-containing protein. (439 aa)
	Z520_04527	Uncharacterized protein. (517 aa)
	Z520_03842	Aspartate aminotransferase. (420 aa)
	Z520_03468	Amidase domain-containing protein. (510 aa)
	Z520_02566	MJ1316 domain-containing protein. (187 aa)
	Z520_01528	Amidase domain-containing protein. (558 aa)
	Z520_00053	Aminotran_1_2 domain-containing protein. (570 aa)
	Z520_00829	Uncharacterized protein. (530 aa)
	Z520_11950	Amine oxidase. (606 aa)
	Z520_11544	Uncharacterized protein. (118 aa)
	Z520_10057	Uncharacterized protein. (515 aa)
	Z520_09798	Uncharacterized protein. (524 aa)
	Z520_09128	Amine oxidase. (477 aa)
	Z520_09144	Amidase domain-containing protein. (571 aa)
	Z520_11561	Uncharacterized protein. (396 aa)
	Z520_11611	Amidase domain-containing protein. (604 aa)
	Z520_07673	Amidase domain-containing protein. (534 aa)
	Z520_07848	Aspartate aminotransferase. (430 aa)
	Z520_07031	Aminotran_1_2 domain-containing protein. (406 aa)
	Z520_07261	Zn(2)-C6 fungal-type domain-containing protein. (688 aa)
	Z520_10231	Amidase domain-containing protein. (536 aa)
	Z520_10064	Uncharacterized protein. (479 aa)
	Z520_06625	Uncharacterized protein. (585 aa)
	Z520_09289	Amine oxidase. (669 aa)
	Z520_05938	Amine oxidase. (435 aa)
	Z520_08214	Amidase domain-containing protein. (568 aa)
	Z520_08324	Uncharacterized protein. (377 aa)
	Z520_08369	Amidase domain-containing protein. (562 aa)
	Z520_07700	AP_endonuc_2 domain-containing protein. (342 aa)
	Z520_03343	Aspartate aminotransferase. (456 aa)
	Z520_03469	Amine oxidase. (604 aa)
	Z520_03494	Amidase domain-containing protein. (510 aa)
	Z520_05200	Uncharacterized protein; Belongs to the cytochrome P450 family. (550 aa)
	Z520_05335	Uncharacterized protein. (347 aa)
	Z520_02151	Uncharacterized protein. (279 aa)
	Z520_04750	Amine oxidase. (710 aa)
	Z520_05025	Uncharacterized protein. (551 aa)
	Z520_02521	SurE domain-containing protein. (354 aa)
	Z520_11560	Uncharacterized protein. (326 aa)
	Z520_11321	Amidase domain-containing protein. (559 aa)
	Z520_01484	Amidase domain-containing protein. (509 aa)
	Z520_01690	Amidase domain-containing protein. (563 aa)
	Z520_01775	AP_endonuc_2 domain-containing protein. (334 aa)
	Z520_10255	Amine oxidase. (676 aa)
	Z520_10048	Uncharacterized protein. (523 aa)
	Z520_10053	Uncharacterized protein. (518 aa)
	Z520_03415	Uncharacterized protein. (527 aa)
	Z520_00615	Amine oxidase. (693 aa)
	Z520_03701	4-hydroxyphenylpyruvate dioxygenase. (420 aa)
	Z520_09639	Amidase domain-containing protein. (497 aa)
	Z520_09684	AP_endonuc_2 domain-containing protein. (341 aa)
	Z520_09333	Amine oxidase. (704 aa)
	Z520_09019	Uncharacterized protein. (879 aa)
	Z520_08628	Aminotran_1_2 domain-containing protein. (573 aa)
	Z520_01150	Uncharacterized protein. (330 aa)
	Z520_08268	Uncharacterized protein. (669 aa)
	Z520_07981	Amidase domain-containing protein. (626 aa)
	Z520_08136	Amine oxidase. (882 aa)
	Z520_06860	Amidase domain-containing protein. (548 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_00053	Z520_01775	A0A0D2J1W0	A0A0D2KB98	Aminotran_1_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.453
Z520_00053	Z520_02661	A0A0D2J1W0	A0A0D2KWE0	Aminotran_1_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.453
Z520_00053	Z520_03343	A0A0D2J1W0	A0A0D2K4D1	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.704
Z520_00053	Z520_03415	A0A0D2J1W0	A0A0D2KCA7	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.625
Z520_00053	Z520_03701	A0A0D2J1W0	A0A0D2KCX7	Aminotran_1_2 domain-containing protein.	4-hydroxyphenylpyruvate dioxygenase.	0.760
Z520_00053	Z520_03842	A0A0D2J1W0	A0A0D2IT77	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.704
Z520_00053	Z520_04016	A0A0D2J1W0	A0A0D2HEL4	Aminotran_1_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.453
Z520_00053	Z520_04397	A0A0D2J1W0	A0A0D2IRY4	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.746
Z520_00053	Z520_07031	A0A0D2J1W0	A0A0D2JTX8	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.436
Z520_00053	Z520_07700	A0A0D2J1W0	A0A0D2K0J4	Aminotran_1_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.453
Z520_00053	Z520_07848	A0A0D2J1W0	A0A0D2JSY8	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.796
Z520_00053	Z520_08306	A0A0D2J1W0	A0A0D2IG66	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.400
Z520_00053	Z520_09684	A0A0D2J1W0	A0A0D2KD33	Aminotran_1_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.453
Z520_00053	Z520_10064	A0A0D2J1W0	A0A0D2JUZ8	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.625
Z520_00615	Z520_03415	A0A0D2KCT4	A0A0D2KCA7	Amine oxidase.	Uncharacterized protein.	0.516
Z520_00615	Z520_06043	A0A0D2KCT4	A0A0D2H808	Amine oxidase.	Amine oxidase.	0.503
Z520_00615	Z520_07031	A0A0D2KCT4	A0A0D2JTX8	Amine oxidase.	Aminotran_1_2 domain-containing protein.	0.406
Z520_00615	Z520_07848	A0A0D2KCT4	A0A0D2JSY8	Amine oxidase.	Aspartate aminotransferase.	0.470
Z520_00615	Z520_08306	A0A0D2KCT4	A0A0D2IG66	Amine oxidase.	Aminotran_1_2 domain-containing protein.	0.687
Z520_00615	Z520_10064	A0A0D2KCT4	A0A0D2JUZ8	Amine oxidase.	Uncharacterized protein.	0.516