(33 nodes) Mixed, incl. Synthesis of PA, and Phosphatidate (PA) phosphatase-related network (Colletotrichum fioriniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CFIO01_05582	Short chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (339 aa)
	CFIO01_08373	LNS2 domain-containing protein. (775 aa)
	CFIO01_10233	Patatin-like phospholipase. (576 aa)
	CFIO01_09449	Hydrolase. (304 aa)
	CFIO01_07747	Phospholipase. (881 aa)
	CFIO01_04472	Phospholipase. (1820 aa)
	CFIO01_00425	O-acyltransferase. (663 aa)
	CFIO01_11127	Acyltransferase. (334 aa)
	CFIO01_13249	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (304 aa)
	CFIO01_08960	Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)
	CFIO01_11063	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (332 aa)
	CFIO01_08076	Lecithin:cholesterol acyltransferase. (672 aa)
	CFIO01_08444	Cytidylyltransferase. (403 aa)
	CFIO01_06511	PAP2 superfamily protein. (412 aa)
	CFIO01_06714	PAP2 superfamily protein. (394 aa)
	CFIO01_11859	Acyltransferase. (763 aa)
	CFIO01_00952	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (452 aa)
	CFIO01_03968	Acyltransferase. (412 aa)
	CFIO01_08508	Acyltransferase. (335 aa)
	CFIO01_03366	O-acyltransferase. (522 aa)
	CFIO01_07338	PAP2 superfamily protein. (387 aa)
	CFIO01_03740	Diacylglycerol acyltransferase. (518 aa)
	CFIO01_10653	MBOAT family protein; Belongs to the membrane-bound acyltransferase family. (524 aa)
	CFIO01_05649	Phospholipase. (864 aa)
	CFIO01_05654	Acyltransferase. (824 aa)
	CFIO01_09938	Uncharacterized protein. (494 aa)
	CFIO01_04864	acidPPc domain-containing protein. (389 aa)
	CFIO01_06868	PAP2 superfamily protein. (297 aa)
	CFIO01_09748	Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (299 aa)
	CFIO01_10055	Lipase_3 domain-containing protein. (623 aa)
	CFIO01_08515	O-acyltransferase. (568 aa)
	CFIO01_04786	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (680 aa)
	CFIO01_08127	PAP2 superfamily protein. (425 aa)

Your Current Organism:

Colletotrichum fioriniae

NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFIO01_00425	CFIO01_03740	A0A010QGV7	A0A010RQ31	O-acyltransferase.	Diacylglycerol acyltransferase.	0.803
CFIO01_00425	CFIO01_08076	A0A010QGV7	A0A010QZC5	O-acyltransferase.	Lecithin:cholesterol acyltransferase.	0.521
CFIO01_00425	CFIO01_08373	A0A010QGV7	A0A010Q2J6	O-acyltransferase.	LNS2 domain-containing protein.	0.423
CFIO01_00425	CFIO01_08515	A0A010QGV7	A0A010S6K3	O-acyltransferase.	O-acyltransferase.	0.900
CFIO01_00952	CFIO01_03740	A0A010RI47	A0A010RQ31	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Diacylglycerol acyltransferase.	0.423
CFIO01_00952	CFIO01_03968	A0A010RI47	A0A010RID7	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Acyltransferase.	0.608
CFIO01_00952	CFIO01_04786	A0A010RI47	A0A010SAG4	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.988
CFIO01_00952	CFIO01_05654	A0A010RI47	A0A010RU93	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Acyltransferase.	0.891
CFIO01_00952	CFIO01_06714	A0A010RI47	A0A010RBK2	Glycerol-3-phosphate dehydrogenase [NAD(+)].	PAP2 superfamily protein.	0.820
CFIO01_00952	CFIO01_06868	A0A010RI47	A0A010S145	Glycerol-3-phosphate dehydrogenase [NAD(+)].	PAP2 superfamily protein.	0.820
CFIO01_00952	CFIO01_07338	A0A010RI47	A0A010RP25	Glycerol-3-phosphate dehydrogenase [NAD(+)].	PAP2 superfamily protein.	0.820
CFIO01_00952	CFIO01_08373	A0A010RI47	A0A010Q2J6	Glycerol-3-phosphate dehydrogenase [NAD(+)].	LNS2 domain-containing protein.	0.825
CFIO01_00952	CFIO01_08508	A0A010RI47	A0A010RIS0	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Acyltransferase.	0.922
CFIO01_00952	CFIO01_09938	A0A010RI47	A0A010RZU3	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein.	0.617
CFIO01_00952	CFIO01_10653	A0A010RI47	A0A010RSL9	Glycerol-3-phosphate dehydrogenase [NAD(+)].	MBOAT family protein; Belongs to the membrane-bound acyltransferase family.	0.833
CFIO01_00952	CFIO01_11127	A0A010RI47	A0A010QJL8	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Acyltransferase.	0.608
CFIO01_00952	CFIO01_11859	A0A010RI47	A0A010RBQ1	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Acyltransferase.	0.963
CFIO01_00952	CFIO01_13249	A0A010RI47	A0A010QKH2	Glycerol-3-phosphate dehydrogenase [NAD(+)].	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.920
CFIO01_03366	CFIO01_03740	A0A010RL78	A0A010RQ31	O-acyltransferase.	Diacylglycerol acyltransferase.	0.803
CFIO01_03366	CFIO01_06714	A0A010RL78	A0A010RBK2	O-acyltransferase.	PAP2 superfamily protein.	0.928