STRINGSTRING
CFIO01_12219 CFIO01_12219 CFIO01_05826 CFIO01_05826 CFIO01_03448 CFIO01_03448 CFIO01_08716 CFIO01_08716 CFIO01_10686 CFIO01_10686 CFIO01_01021 CFIO01_01021 CFIO01_04559 CFIO01_04559 CFIO01_02694 CFIO01_02694 TRM82 TRM82 CFIO01_13259 CFIO01_13259 CFIO01_05487 CFIO01_05487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_12219tRNA (Adenine-N(1)-)-methyltransferase. (446 aa)
CFIO01_05826SAM-dependent MTase TRM10-type domain-containing protein. (467 aa)
CFIO01_03448Gcd10p family protein. (624 aa)
CFIO01_08716Uncharacterized protein. (270 aa)
CFIO01_10686tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs. (767 aa)
CFIO01_01021tRNA methyltransferase complex GCD14 subunit. (492 aa)
CFIO01_04559Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (625 aa)
CFIO01_02694tRNA pseudouridine synthase A. (612 aa)
TRM82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (575 aa)
CFIO01_13259N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (679 aa)
CFIO01_05487tRNA pseudouridine synthase A. (549 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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