STRINGSTRING
CFIO01_03298 CFIO01_03298 CFIO01_02188 CFIO01_02188 CFIO01_02448 CFIO01_02448 CFIO01_08500 CFIO01_08500 CFIO01_05671 CFIO01_05671
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_03298Transient receptor potential ion channel. (742 aa)
CFIO01_02188Mannan endo-1,6-alpha-mannosidase. (467 aa)
CFIO01_02448SMI1/KNR4 family protein. (541 aa)
CFIO01_08500Transient receptor potential ion channel. (769 aa)
CFIO01_05671Mannan endo-1,6-alpha-mannosidase. (500 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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