STRINGSTRING
CFIO01_06933 CFIO01_06933 CFIO01_10550 CFIO01_10550 CFIO01_10526 CFIO01_10526 CFIO01_07209 CFIO01_07209 CFIO01_02777 CFIO01_02777 CFIO01_12595 CFIO01_12595 CFIO01_12269 CFIO01_12269 CFIO01_10402 CFIO01_10402 CFIO01_11104 CFIO01_11104 CFIO01_06564 CFIO01_06564 CFIO01_01434 CFIO01_01434 CFIO01_06835 CFIO01_06835
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_06933Importin subunit alpha; Belongs to the importin alpha family. (551 aa)
CFIO01_10550Importin N-terminal domain-containing protein. (876 aa)
CFIO01_10526Cse1. (959 aa)
CFIO01_07209Uncharacterized protein. (862 aa)
CFIO01_02777Uncharacterized protein. (845 aa)
CFIO01_12595GDP/GTP exchange factor. (676 aa)
CFIO01_12269Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (533 aa)
CFIO01_10402RanBD1 domain-containing protein. (485 aa)
CFIO01_11104Ran GTPase activating protein 1. (420 aa)
CFIO01_06564Importin N-terminal domain-containing protein. (1079 aa)
CFIO01_01434GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
CFIO01_06835Uncharacterized protein. (471 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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