STRINGSTRING
CFIO01_00893 CFIO01_00893 CFIO01_02351 CFIO01_02351 CFIO01_13327 CFIO01_13327 CFIO01_07854 CFIO01_07854 CFIO01_04812 CFIO01_04812 CFIO01_01254 CFIO01_01254 CFIO01_05480 CFIO01_05480 CFIO01_03002 CFIO01_03002
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_00893UBX domain-containing protein. (565 aa)
CFIO01_02351UBA/TS-N domain-containing protein. (318 aa)
CFIO01_13327AAA family ATPase; Belongs to the AAA ATPase family. (819 aa)
CFIO01_07854ATPase. (781 aa)
CFIO01_04812ATPase. (594 aa)
CFIO01_01254SEP domain-containing protein. (421 aa)
CFIO01_05480Ubiquitin fusion degradation protein UFD1. (374 aa)
CFIO01_03002Nuclear protein localization protein 4. (654 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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