Your Input: | |
| | CFIO01_07357 | Transcription mediator subunit Med12. (1534 aa) |
| | CFIO01_08353 | HMG box protein. (332 aa) |
| | CFIO01_03779 | Uncharacterized protein. (381 aa) |
| | CFIO01_13276 | Transcription initiation factor IIE subunit beta. (480 aa) |
| | CFIO01_08417 | Brf1-like TBP-binding domain-containing protein. (732 aa) |
| | CFIO01_07580 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (123 aa) |
| | CFIO01_02884 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa) |
| | CFIO01_00507 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa) |
| | CFIO01_09591 | mRNA-capping enzyme subunit beta. (863 aa) |
| | MED17 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (676 aa) |
| | CFIO01_06903 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (127 aa) |
| | CFIO01_12573 | Rtr1/RPAP2 family protein. (299 aa) |
| | MED8 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (295 aa) |
| | CFIO01_05846 | Transcription initiation factor TFIID subunit A. (842 aa) |
| | CFIO01_12629 | Uncharacterized protein. (415 aa) |
| | CFIO01_03757 | RNA polymerase I specific transcription initiation factor RRN3. (686 aa) |
| | CFIO01_12016 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1118 aa) |
| | CFIO01_10277 | mRNA capping enzyme. (385 aa) |
| | CFIO01_03961 | Git3 domain-containing protein. (393 aa) |
| | CFIO01_04001 | Peptidase S41 family protein. (783 aa) |
| | CFIO01_10327 | Nitroreductase. (204 aa) |
| | CFIO01_04171 | Uncharacterized protein. (730 aa) |
| | CFIO01_07563 | Protein kinase domain-containing protein. (552 aa) |
| | CFIO01_09072 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (330 aa) |
| | CFIO01_05351 | DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (396 aa) |
| | CFIO01_09589 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1041 aa) |
| | CFIO01_07642 | RNA polymerase N/8 kDa subunit. (132 aa) |
| | CFIO01_05269 | RNA polymerase M/15 kDa subunit. (198 aa) |
| | CFIO01_08112 | Transcription factor TFIID. (256 aa) |
| | CFIO01_04314 | Uncharacterized protein. (307 aa) |
| | CFIO01_06333 | Mediator of RNA polymerase II transcription subunit 13; Component of the SRB8-11 complex. The SRB8-11 complex is a regulatory module of the Mediator complex which is itself involved in regulation of basal and activated RNA polymerase II-dependent transcription. The SRB8-11 complex may be involved in the transcriptional repression of a subset of genes regulated by Mediator. It may inhibit the association of the Mediator complex with RNA polymerase II to form the holoenzyme complex. (1538 aa) |
| | CFIO01_10280 | Tetratricopeptide. (1221 aa) |
| | CFIO01_11672 | RNA polymerase Rpb7-like domain-containing protein. (488 aa) |
| | CFIO01_08468 | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (138 aa) |
| | CFIO01_01079 | Uncharacterized protein. (213 aa) |
| | CFIO01_06754 | Uncharacterized protein. (442 aa) |
| | CFIO01_11480 | Uncharacterized protein. (255 aa) |
| | MED10 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (160 aa) |
| | CFIO01_01604 | Uncharacterized protein. (403 aa) |
| | CFIO01_09946 | CDK-activating kinase assembly factor MAT1. (366 aa) |
| | CFIO01_12145 | TYR_PHOSPHATASE_2 domain-containing protein. (640 aa) |
| | CFIO01_02040 | Integral membrane protein. (506 aa) |
| | CFIO01_01388 | Uncharacterized protein. (576 aa) |
| | CFIO01_04517 | Transcription initiation factor IID. (177 aa) |
| | CFIO01_10522 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (254 aa) |
| | CFIO01_11308 | DNA-directed RNA polymerase III complex subunit Rpc37. (396 aa) |
| | CFIO01_09117 | Abhydrolase_4 domain-containing protein. (547 aa) |
| | CFIO01_11603 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1750 aa) |
| | CFIO01_09902 | WD domain-containing protein. (789 aa) |
| | CFIO01_01121 | Uncharacterized protein. (156 aa) |
| | CFIO01_02732 | Uncharacterized protein. (316 aa) |
| | CFIO01_10048 | DNA repair helicase rad25. (822 aa) |
| | CFIO01_11818 | RNA_pol_L_2 domain-containing protein. (140 aa) |
| | CFIO01_09541 | Fungal specific transcription factor. (788 aa) |
| | CFIO01_08372 | Transcription initiation factor TFIID subunit 9. (310 aa) |
| | CFIO01_09006 | C-type cyclin. (651 aa) |
| | CFIO01_01416 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1225 aa) |
| | CFIO01_13347 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (679 aa) |
| | CFIO01_07574 | Phosphoprotein phosphatase. (395 aa) |
| | CFIO01_04650 | Uncharacterized protein. (262 aa) |
| | MED9 | Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (157 aa) |
| | CFIO01_09060 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (707 aa) |
| | CFIO01_09309 | Uncharacterized protein. (162 aa) |
| | CFIO01_07680 | Uncharacterized protein. (303 aa) |
| | MED5 | Mediator of RNA polymerase II transcription subunit 5; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1035 aa) |
| | CFIO01_02695 | Uncharacterized protein. (191 aa) |
| | CFIO01_10627 | Zn(2)-C6 fungal-type domain-containing protein. (736 aa) |
| | CFIO01_07050 | Uncharacterized protein. (312 aa) |
| | CFIO01_05720 | Integral membrane protein. (751 aa) |
| | CFIO01_05388 | Cdc73 family RNA pol II accessory factor. (623 aa) |
| | CFIO01_10232 | Uncharacterized protein. (401 aa) |
| | CFIO01_02203 | TAFII55_N domain-containing protein. (495 aa) |
| | CFIO01_10421 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (409 aa) |
| | CFIO01_01733 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (836 aa) |
| | CFIO01_10341 | Zn(2)-C6 fungal-type domain-containing protein. (657 aa) |
| | CFIO01_08926 | Protein kinase domain-containing protein. (1095 aa) |
| | CFIO01_08878 | Serine protease; Belongs to the peptidase S1B family. (816 aa) |
| | CFIO01_00072 | Uncharacterized protein. (274 aa) |
| | CFIO01_04954 | RNA polymerase Rpb3/RpoA insert domain-containing protein. (372 aa) |
| | CFIO01_00196 | Transcription factor TFIIB. (779 aa) |
| | CFIO01_05489 | RNA polymerase III subunit C17. (150 aa) |
| | CFIO01_00429 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1456 aa) |
| | CFIO01_12733 | Uncharacterized protein. (578 aa) |
| | CFIO01_07631 | Transcription factor IIA. (380 aa) |
| | CFIO01_06695 | Uncharacterized protein. (279 aa) |
| | CFIO01_10115 | Uncharacterized protein. (232 aa) |
| | CFIO01_09523 | Nitroreductase. (256 aa) |
| | CFIO01_13380 | Uncharacterized protein. (685 aa) |
| | CFIO01_11112 | Bromodomain associated domain-containing protein. (368 aa) |
| | CFIO01_11676 | Protein kinase domain-containing protein. (452 aa) |
| | CFIO01_13517 | Uncharacterized protein. (456 aa) |
| | CFIO01_04474 | Plus-3 domain-containing protein. (606 aa) |
| | CFIO01_08911 | RNA polymerase II transcription factor B subunit 5. (71 aa) |
| | CFIO01_12663 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (480 aa) |
| | CFIO01_01633 | Uncharacterized protein. (1557 aa) |
| | CFIO01_11769 | RNA polymerase III subunit Rpc25. (197 aa) |
| | CFIO01_11396 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1258 aa) |
| | CFIO01_03681 | Transcription factor S-II. (159 aa) |
| | MED16 | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1021 aa) |
| | CFIO01_10362 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa) |
| | CFIO01_08379 | Uncharacterized protein. (629 aa) |
| | CFIO01_03750 | RNA cap guanine-N2 methyltransferase. (251 aa) |
| | CFIO01_06485 | TATA box binding protein associated factor. (461 aa) |
| | CFIO01_06340 | mRNA cap guanine-N7 methyltransferase. (485 aa) |
| | CFIO01_04561 | Transcription factor tfb4. (364 aa) |
| | CFIO01_03422 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (203 aa) |
| | CFIO01_02885 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (142 aa) |
| | CFIO01_11562 | EF-hand domain-containing protein. (699 aa) |
| | CFIO01_09310 | Peptidase S41 family protein. (577 aa) |
| | MED11 | Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (199 aa) |
| | CFIO01_04784 | Uncharacterized protein. (562 aa) |
| | CFIO01_10843 | Transcription initiation factor TFIID subunit 1. (1238 aa) |
| | CFIO01_11638 | DNA repair helicase. (791 aa) |
| | CFIO01_02214 | DNA-directed RNA polymerase II subunit RPB7. (171 aa) |
| | CFIO01_10777 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (569 aa) |
| | CFIO01_05102 | TFIIS N-terminal domain-containing protein. (416 aa) |
| | CFIO01_01740 | DNA repair helicase. (908 aa) |
| | CFIO01_12359 | NUDIX domain-containing protein. (183 aa) |
| | CFIO01_04534 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1151 aa) |
| | CFIO01_03947 | DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (270 aa) |
| | CFIO01_00358 | DNA directed RNA polymerase. (75 aa) |
| | CFIO01_05523 | FACT complex subunit SPT16. (1031 aa) |
| | CFIO01_05533 | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1411 aa) |
| | CFIO01_10810 | TFIIH p62 subunit domain-containing protein. (664 aa) |
| | CFIO01_03355 | RNA polymerase Rpb6. (153 aa) |
| | MED18 | Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (315 aa) |
| | CFIO01_12874 | RNA polymerase Rpb3/RpoA insert domain-containing protein. (339 aa) |
| | CFIO01_07305 | RNA polymerase Rpb4. (144 aa) |
| | CFIO01_09711 | Uncharacterized protein. (315 aa) |
| | CFIO01_10590 | CTD kinase subunit gamma. (262 aa) |
| | CFIO01_11960 | SAP30_Sin3_bdg domain-containing protein. (180 aa) |
| | CFIO01_08615 | Cyclin-K. (461 aa) |
| | CFIO01_07597 | Peptidase S41 family protein. (870 aa) |
| | CFIO01_09936 | Myb-like DNA-binding domain-containing protein. (630 aa) |
| | CFIO01_02253 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (494 aa) |
| | CFIO01_13182 | Transcription elongation factor S-II. (302 aa) |
| | CFIO01_09347 | Cyclin ccl1. (374 aa) |
| | CFIO01_04285 | Zn(2)-C6 fungal-type domain-containing protein. (452 aa) |
| | MED4 | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (353 aa) |
| | CFIO01_03122 | A49-like RNA polymerase I associated factor. (441 aa) |
| | CFIO01_03147 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1704 aa) |
| | CFIO01_05236 | TAFII28 domain-containing protein. (327 aa) |
| | CFIO01_06220 | Uncharacterized protein. (613 aa) |
| | CFIO01_01424 | Transcription initiation factor IIF. (364 aa) |
| | CFIO01_13045 | TFIIE alpha subunit. (408 aa) |
| | CFIO01_00685 | RNA polymerase II holoenzyme cyclin-like subunit; Belongs to the cyclin family. (317 aa) |
| | CFIO01_10814 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (657 aa) |
| | CFIO01_10039 | Uncharacterized protein. (464 aa) |
| | CFIO01_13737 | RNA polymerase Rpb5 domain-containing protein. (230 aa) |
