STRINGSTRING
CFIO01_04947 CFIO01_04947 CFIO01_07880 CFIO01_07880 CFIO01_11519 CFIO01_11519 CFIO01_13365 CFIO01_13365 CFIO01_07956 CFIO01_07956 CFIO01_00113 CFIO01_00113
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_04947Uncharacterized protein. (691 aa)
CFIO01_07880Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)
CFIO01_11519Uncharacterized protein. (142 aa)
CFIO01_13365Uncharacterized protein. (277 aa)
CFIO01_07956Ima1_N domain-containing protein. (740 aa)
CFIO01_00113Spindle pole body-associated protein sad1. (1237 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.