(20 nodes) SCF ubiquitin ligase complex network (Colletotrichum fioriniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CFIO01_02549	WD domain-containing protein. (992 aa)
	CFIO01_09471	F-box domain-containing protein. (686 aa)
	CFIO01_11609	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (112 aa)
	CFIO01_05329	Cyclic nucleotide-binding domain-containing protein. (980 aa)
	CFIO01_13022	F-box domain-containing protein. (513 aa)
	CFIO01_04524	Leucine Rich Repeat domain-containing protein. (642 aa)
	CFIO01_10513	WD domain-containing protein. (1033 aa)
	CFIO01_08530	WD domain-containing protein. (673 aa)
	CFIO01_05260	WD domain-containing protein. (803 aa)
	CFIO01_07158	Isoeugenol monooxygenase. (539 aa)
	CFIO01_13661	Uncharacterized protein. (318 aa)
	CFIO01_07350	Uncharacterized protein. (249 aa)
	CFIO01_05299	WD repeat domain-containing protein. (709 aa)
	CFIO01_02620	Uncharacterized protein. (533 aa)
	CFIO01_10629	Retinal pigment epithelial membrane protein. (619 aa)
	CFIO01_08471	Cullin family protein; Belongs to the cullin family. (767 aa)
	CFIO01_02633	F-box domain-containing protein. (783 aa)
	CFIO01_07630	9-cis-epoxycarotenoid dioxygenase 1. (479 aa)
	CFIO01_11879	E3 ubiquitin-protein ligase RBX1. (118 aa)
	CFIO01_06973	Ubiquitin-conjugating enzyme. (245 aa)

Your Current Organism:

Colletotrichum fioriniae

NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFIO01_02549	CFIO01_06973	A0A010R9H2	A0A010R9A1	WD domain-containing protein.	Ubiquitin-conjugating enzyme.	0.466
CFIO01_02549	CFIO01_08471	A0A010R9H2	A0A010QX64	WD domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.858
CFIO01_02549	CFIO01_11879	A0A010R9H2	A0A010R1T1	WD domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.926
CFIO01_02633	CFIO01_05260	A0A010QZI5	A0A010S5P0	F-box domain-containing protein.	WD domain-containing protein.	0.430
CFIO01_02633	CFIO01_06973	A0A010QZI5	A0A010R9A1	F-box domain-containing protein.	Ubiquitin-conjugating enzyme.	0.419
CFIO01_02633	CFIO01_08471	A0A010QZI5	A0A010QX64	F-box domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.929
CFIO01_02633	CFIO01_10513	A0A010QZI5	A0A010SF96	F-box domain-containing protein.	WD domain-containing protein.	0.498
CFIO01_02633	CFIO01_11879	A0A010QZI5	A0A010R1T1	F-box domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.879
CFIO01_04524	CFIO01_13022	A0A010RYE8	A0A010RYA2	Leucine Rich Repeat domain-containing protein.	F-box domain-containing protein.	0.420
CFIO01_05260	CFIO01_02633	A0A010S5P0	A0A010QZI5	WD domain-containing protein.	F-box domain-containing protein.	0.430
CFIO01_05260	CFIO01_06973	A0A010S5P0	A0A010R9A1	WD domain-containing protein.	Ubiquitin-conjugating enzyme.	0.599
CFIO01_05260	CFIO01_08471	A0A010S5P0	A0A010QX64	WD domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.987
CFIO01_05260	CFIO01_11879	A0A010S5P0	A0A010R1T1	WD domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.962
CFIO01_05299	CFIO01_06973	A0A010QJ12	A0A010R9A1	WD repeat domain-containing protein.	Ubiquitin-conjugating enzyme.	0.466
CFIO01_05299	CFIO01_08471	A0A010QJ12	A0A010QX64	WD repeat domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.858
CFIO01_05299	CFIO01_11879	A0A010QJ12	A0A010R1T1	WD repeat domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.926
CFIO01_05329	CFIO01_08471	A0A010RTY0	A0A010QX64	Cyclic nucleotide-binding domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.848
CFIO01_05329	CFIO01_11879	A0A010RTY0	A0A010R1T1	Cyclic nucleotide-binding domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.867
CFIO01_06973	CFIO01_02549	A0A010R9A1	A0A010R9H2	Ubiquitin-conjugating enzyme.	WD domain-containing protein.	0.466
CFIO01_06973	CFIO01_02633	A0A010R9A1	A0A010QZI5	Ubiquitin-conjugating enzyme.	F-box domain-containing protein.	0.419