STRINGSTRING
CFIO01_06018 CFIO01_06018 CFIO01_02077 CFIO01_02077 CFIO01_09447 CFIO01_09447 CFIO01_06598 CFIO01_06598 CFIO01_09951 CFIO01_09951 CFIO01_11613 CFIO01_11613 CFIO01_08211 CFIO01_08211 CFIO01_07072 CFIO01_07072 CFIO01_11204 CFIO01_11204 CFIO01_13522 CFIO01_13522 CFIO01_12502 CFIO01_12502 CFIO01_05388 CFIO01_05388 CFIO01_10421 CFIO01_10421 CFIO01_12995 CFIO01_12995 CLP1 CLP1 CFIO01_04474 CFIO01_04474 CFIO01_02009 CFIO01_02009 CFIO01_04444 CFIO01_04444 CFIO01_03084 CFIO01_03084 CFIO01_12959 CFIO01_12959 CFIO01_03365 CFIO01_03365 CFIO01_07305 CFIO01_07305 CFIO01_04426 CFIO01_04426
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_06018Cleavage and polyadenylation specificity factor subunit 2. (972 aa)
CFIO01_02077Uncharacterized protein. (514 aa)
CFIO01_09447CID domain-containing protein. (413 aa)
CFIO01_06598CID domain-containing protein. (702 aa)
CFIO01_09951Uncharacterized protein. (255 aa)
CFIO01_11613CPSF A subunit region. (1439 aa)
CFIO01_08211Cleavage and polyadenylation specificity factor subunit 5. (275 aa)
CFIO01_07072mRNA 3'-end-processing protein RNA14. (1057 aa)
CFIO01_11204Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (637 aa)
CFIO01_13522RNA recognition domain-containing protein. (762 aa)
CFIO01_12502RNA recognition domain-containing protein. (311 aa)
CFIO01_05388Cdc73 family RNA pol II accessory factor. (623 aa)
CFIO01_10421Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (409 aa)
CFIO01_12995Endonuclease/Exonuclease/phosphatase. (1199 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (456 aa)
CFIO01_04474Plus-3 domain-containing protein. (606 aa)
CFIO01_02009mRNA cleavage and polyadenylation specificity factor complex subunit. (725 aa)
CFIO01_04444Nuclear polyadenylated RNA-binding protein. (572 aa)
CFIO01_03084THO complex subunit 2. (2433 aa)
CFIO01_12959Uncharacterized protein. (364 aa)
CFIO01_03365WD domain-containing protein. (648 aa)
CFIO01_07305RNA polymerase Rpb4. (144 aa)
CFIO01_04426MPE1. (637 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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