(17 nodes) Chromosome separation network (Colletotrichum fioriniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CFIO01_10114	Tetratricopeptide. (666 aa)
	CFIO01_06464	RecQ mediated genome instability protein Rmi1. (246 aa)
	CFIO01_07750	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1774 aa)
	CFIO01_07008	Uncharacterized protein. (111 aa)
	CFIO01_06839	Uncharacterized protein. (428 aa)
	CFIO01_11765	Protein kinase domain-containing protein. (860 aa)
	CFIO01_05845	PCI domain-containing protein. (575 aa)
	CFIO01_11437	Peptidase family C50. (2121 aa)
	CFIO01_10489	Protein kinase domain-containing protein. (1010 aa)
	CFIO01_11326	DNA repair protein. (932 aa)
	CFIO01_00828	Uncharacterized protein. (1109 aa)
	CFIO01_10322	RecF/RecN/SMC N terminal domain-containing protein. (1117 aa)
	CFIO01_07163	ERCC4 domain-containing protein. (797 aa)
	CFIO01_06841	Uncharacterized protein. (147 aa)
	CFIO01_06339	26S proteasome subunit RPN7. (487 aa)
	CFIO01_07014	Tetratricopeptide. (621 aa)
	CFIO01_06840	SEC63 domain-containing protein. (194 aa)

Your Current Organism:

Colletotrichum fioriniae

NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFIO01_00828	CFIO01_07750	A0A010RT11	A0A010QMY1	Uncharacterized protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.558
CFIO01_00828	CFIO01_10489	A0A010RT11	A0A010RPG7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.448
CFIO01_00828	CFIO01_11437	A0A010RT11	A0A010RMR1	Uncharacterized protein.	Peptidase family C50.	0.763
CFIO01_05845	CFIO01_06339	A0A010R8J3	A0A010S7I0	PCI domain-containing protein.	26S proteasome subunit RPN7.	0.999
CFIO01_06339	CFIO01_05845	A0A010S7I0	A0A010R8J3	26S proteasome subunit RPN7.	PCI domain-containing protein.	0.999
CFIO01_06339	CFIO01_10114	A0A010S7I0	A0A010RW41	26S proteasome subunit RPN7.	Tetratricopeptide.	0.648
CFIO01_06464	CFIO01_07750	A0A010QIK5	A0A010QMY1	RecQ mediated genome instability protein Rmi1.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.414
CFIO01_06464	CFIO01_10322	A0A010QIK5	A0A010RTW3	RecQ mediated genome instability protein Rmi1.	RecF/RecN/SMC N terminal domain-containing protein.	0.615
CFIO01_06464	CFIO01_11326	A0A010QIK5	A0A010RSD3	RecQ mediated genome instability protein Rmi1.	DNA repair protein.	0.897
CFIO01_07014	CFIO01_10114	A0A010SEC3	A0A010RW41	Tetratricopeptide.	Tetratricopeptide.	0.999
CFIO01_07014	CFIO01_10489	A0A010SEC3	A0A010RPG7	Tetratricopeptide.	Protein kinase domain-containing protein.	0.872
CFIO01_07014	CFIO01_11437	A0A010SEC3	A0A010RMR1	Tetratricopeptide.	Peptidase family C50.	0.889
CFIO01_07750	CFIO01_00828	A0A010QMY1	A0A010RT11	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Uncharacterized protein.	0.558
CFIO01_07750	CFIO01_06464	A0A010QMY1	A0A010QIK5	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	RecQ mediated genome instability protein Rmi1.	0.414
CFIO01_07750	CFIO01_10114	A0A010QMY1	A0A010RW41	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Tetratricopeptide.	0.408
CFIO01_07750	CFIO01_10322	A0A010QMY1	A0A010RTW3	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	RecF/RecN/SMC N terminal domain-containing protein.	0.739
CFIO01_07750	CFIO01_10489	A0A010QMY1	A0A010RPG7	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Protein kinase domain-containing protein.	0.569
CFIO01_07750	CFIO01_11437	A0A010QMY1	A0A010RMR1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Peptidase family C50.	0.719
CFIO01_07750	CFIO01_11765	A0A010QMY1	A0A010R5K1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Protein kinase domain-containing protein.	0.686
CFIO01_10114	CFIO01_06339	A0A010RW41	A0A010S7I0	Tetratricopeptide.	26S proteasome subunit RPN7.	0.648