STRINGSTRING
CFIO01_06732 CFIO01_06732 CFIO01_05374 CFIO01_05374 CFIO01_12822 CFIO01_12822 CFIO01_12610 CFIO01_12610 CFIO01_03433 CFIO01_03433 CFIO01_09937 CFIO01_09937 CFIO01_06733 CFIO01_06733 CFIO01_08005 CFIO01_08005 CFIO01_00678 CFIO01_00678
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_06732Mov34/MPN/PAD-1 family protein. (415 aa)
CFIO01_05374Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
CFIO01_12822RPN13_C domain-containing protein. (394 aa)
CFIO01_12610AN1-like Zinc finger. (311 aa)
CFIO01_03433WLM domain-containing protein. (346 aa)
CFIO01_09937UV excision repair protein Rad23. (389 aa)
CFIO01_06733Uncharacterized protein. (466 aa)
CFIO01_08005Ubiquitin carboxyl-terminal hydrolase. (566 aa)
CFIO01_00678GPI mannosyltransferase. (2065 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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