(35 nodes) SCF ubiquitin ligase complex network (Colletotrichum fioriniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CFIO01_02652	Extracellular sulfatase Sulf-2. (509 aa)
	CFIO01_05370	Uncharacterized protein. (584 aa)
	CFIO01_08794	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	CFIO01_02633	F-box domain-containing protein. (783 aa)
	CFIO01_13022	F-box domain-containing protein. (513 aa)
	CFIO01_04524	Leucine Rich Repeat domain-containing protein. (642 aa)
	CFIO01_09471	F-box domain-containing protein. (686 aa)
	CFIO01_07158	Isoeugenol monooxygenase. (539 aa)
	CFIO01_05260	WD domain-containing protein. (803 aa)
	CFIO01_00849	F-box domain-containing protein. (635 aa)
	CFIO01_11931	Arylsulfatase. (553 aa)
	CFIO01_07630	9-cis-epoxycarotenoid dioxygenase 1. (479 aa)
	CFIO01_06973	Ubiquitin-conjugating enzyme. (245 aa)
	CFIO01_02549	WD domain-containing protein. (992 aa)
	CFIO01_10451	Uncharacterized protein. (492 aa)
	CFIO01_08924	F-box domain-containing protein. (657 aa)
	CFIO01_00852	Uncharacterized protein. (878 aa)
	CFIO01_09419	F-box domain-containing protein. (568 aa)
	CFIO01_11609	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (112 aa)
	CFIO01_04273	Arylsulfatase A. (826 aa)
	CFIO01_07350	Uncharacterized protein. (249 aa)
	CFIO01_05299	WD repeat domain-containing protein. (709 aa)
	CFIO01_12886	F-box domain-containing protein. (747 aa)
	CFIO01_02620	Uncharacterized protein. (533 aa)
	CFIO01_02080	Uncharacterized protein. (461 aa)
	CFIO01_03662	Uncharacterized protein. (569 aa)
	CFIO01_03403	Arylsulfatase. (558 aa)
	CFIO01_10629	Retinal pigment epithelial membrane protein. (619 aa)
	CFIO01_08471	Cullin family protein; Belongs to the cullin family. (767 aa)
	CFIO01_07781	Uncharacterized protein. (437 aa)
	CFIO01_13691	Uncharacterized protein. (335 aa)
	CFIO01_08791	Uncharacterized protein. (625 aa)
	CFIO01_01422	Ubiquitin family protein. (73 aa)
	CFIO01_10548	Uncharacterized protein. (641 aa)
	CFIO01_05329	Cyclic nucleotide-binding domain-containing protein. (980 aa)

Your Current Organism:

Colletotrichum fioriniae

NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFIO01_01422	CFIO01_02549	A0A010RRT2	A0A010R9H2	Ubiquitin family protein.	WD domain-containing protein.	0.771
CFIO01_01422	CFIO01_02633	A0A010RRT2	A0A010QZI5	Ubiquitin family protein.	F-box domain-containing protein.	0.674
CFIO01_01422	CFIO01_05260	A0A010RRT2	A0A010S5P0	Ubiquitin family protein.	WD domain-containing protein.	0.516
CFIO01_01422	CFIO01_05299	A0A010RRT2	A0A010QJ12	Ubiquitin family protein.	WD repeat domain-containing protein.	0.771
CFIO01_01422	CFIO01_05329	A0A010RRT2	A0A010RTY0	Ubiquitin family protein.	Cyclic nucleotide-binding domain-containing protein.	0.674
CFIO01_01422	CFIO01_06973	A0A010RRT2	A0A010R9A1	Ubiquitin family protein.	Ubiquitin-conjugating enzyme.	0.486
CFIO01_01422	CFIO01_08471	A0A010RRT2	A0A010QX64	Ubiquitin family protein.	Cullin family protein; Belongs to the cullin family.	0.955
CFIO01_01422	CFIO01_08794	A0A010RRT2	A0A010RX72	Ubiquitin family protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.565
CFIO01_01422	CFIO01_09471	A0A010RRT2	A0A010RYQ4	Ubiquitin family protein.	F-box domain-containing protein.	0.680
CFIO01_01422	CFIO01_11609	A0A010RRT2	A0A010RIY4	Ubiquitin family protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.584
CFIO01_01422	CFIO01_13022	A0A010RRT2	A0A010RYA2	Ubiquitin family protein.	F-box domain-containing protein.	0.701
CFIO01_02549	CFIO01_01422	A0A010R9H2	A0A010RRT2	WD domain-containing protein.	Ubiquitin family protein.	0.771
CFIO01_02549	CFIO01_06973	A0A010R9H2	A0A010R9A1	WD domain-containing protein.	Ubiquitin-conjugating enzyme.	0.466
CFIO01_02549	CFIO01_08471	A0A010R9H2	A0A010QX64	WD domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.858
CFIO01_02549	CFIO01_08794	A0A010R9H2	A0A010RX72	WD domain-containing protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.634
CFIO01_02633	CFIO01_01422	A0A010QZI5	A0A010RRT2	F-box domain-containing protein.	Ubiquitin family protein.	0.674
CFIO01_02633	CFIO01_05260	A0A010QZI5	A0A010S5P0	F-box domain-containing protein.	WD domain-containing protein.	0.430
CFIO01_02633	CFIO01_06973	A0A010QZI5	A0A010R9A1	F-box domain-containing protein.	Ubiquitin-conjugating enzyme.	0.419
CFIO01_02633	CFIO01_08471	A0A010QZI5	A0A010QX64	F-box domain-containing protein.	Cullin family protein; Belongs to the cullin family.	0.929
CFIO01_04524	CFIO01_13022	A0A010RYE8	A0A010RYA2	Leucine Rich Repeat domain-containing protein.	F-box domain-containing protein.	0.420