STRINGSTRING
CFIO01_03845 CFIO01_03845 CFIO01_12490 CFIO01_12490 CFIO01_02336 CFIO01_02336 CFIO01_05378 CFIO01_05378 CFIO01_13199 CFIO01_13199 CFIO01_12891 CFIO01_12891 CFIO01_10929 CFIO01_10929 CFIO01_08215 CFIO01_08215 CFIO01_09899 CFIO01_09899 CFIO01_05788 CFIO01_05788 CFIO01_13575 CFIO01_13575 CFIO01_04426 CFIO01_04426 CFIO01_07019 CFIO01_07019
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_03845Zinc knuckle. (757 aa)
CFIO01_124905'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1014 aa)
CFIO01_02336Zinc knuckle. (125 aa)
CFIO01_05378CCHC-type domain-containing protein. (717 aa)
CFIO01_13199Zinc knuckle. (224 aa)
CFIO01_12891Zinc knuckle. (365 aa)
CFIO01_10929CCHC-type domain-containing protein. (462 aa)
CFIO01_08215CCHC-type domain-containing protein. (298 aa)
CFIO01_09899Zinc knuckle. (593 aa)
CFIO01_05788Cytidine and deoxycytidylate deaminase zinc-binding region. (451 aa)
CFIO01_13575Zinc knuckle. (876 aa)
CFIO01_04426MPE1. (637 aa)
CFIO01_07019CCHC-type domain-containing protein. (294 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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