STRINGSTRING
CFIO01_12667 CFIO01_12667 CFIO01_05069 CFIO01_05069 CFIO01_12752 CFIO01_12752 CFIO01_10045 CFIO01_10045 CFIO01_09389 CFIO01_09389 CFIO01_08130 CFIO01_08130 CFIO01_09678 CFIO01_09678 CFIO01_09589 CFIO01_09589 CFIO01_11076 CFIO01_11076 CFIO01_11161 CFIO01_11161 CFIO01_04279 CFIO01_04279 CFIO01_11812 CFIO01_11812
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_12667Ribosomal protein L27. (140 aa)
CFIO01_05069eIF-5a domain-containing protein. (680 aa)
CFIO01_12752Eukaryotic translation initiation factor 5A. (163 aa)
CFIO01_10045Ribosomal protein L19. (219 aa)
CFIO01_09389Ribosomal protein L21e. (160 aa)
CFIO01_0813050S ribosomal protein L2. (384 aa)
CFIO01_0967860S ribosomal protein L14-B. (147 aa)
CFIO01_09589Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1041 aa)
CFIO01_11076KOW domain-containing protein domain-containing protein. (391 aa)
CFIO01_1116160S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
CFIO01_04279Ribosomal protein L24. (136 aa)
CFIO01_1181260S ribosomal protein L2. (255 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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