STRINGSTRING
CFIO01_09017 CFIO01_09017 CFIO01_08915 CFIO01_08915 CFIO01_10828 CFIO01_10828 CFIO01_08359 CFIO01_08359 CFIO01_09388 CFIO01_09388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFIO01_09017S4 domain-containing protein. (530 aa)
CFIO01_08915U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
CFIO01_1082840S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
CFIO01_08359Tyrosine--tRNA ligase. (635 aa)
CFIO01_0938840S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (192 aa)
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.