22 items (Aspergillus uvarum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A319BTU7	Ribosome biogenesis protein Nsa2. (261 aa)
	A0A319BUI4	Noc2-domain-containing protein. (802 aa)
	A0A319BV19	Brix-domain-containing protein. (358 aa)
	A0A319BXS9	F-box domain protein. (365 aa)
	A0A319BZ95	Uncharacterized protein. (244 aa)
	A0A319C4W8	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (218 aa)
	A0A319C902	Protein MAK16; Belongs to the MAK16 family. (333 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (811 aa)
	A0A319CDR0	Uncharacterized protein. (188 aa)
	A0A319CE52	RRM domain-containing protein. (459 aa)
	A0A319CGH3	RNA helicase. (648 aa)
	A0A319CIM9	DUF1665 domain protein. (290 aa)
	A0A319CJJ9	60s ribosomal protein L30 isolog. (188 aa)
	A0A319CN85	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (693 aa)
	A0A319CSG6	CBF-domain-containing protein. (1136 aa)
	A0A319CW15	P-loop containing nucleoside triphosphate hydrolase protein. (870 aa)
	A0A319CZB0	RNA helicase. (611 aa)
	A0A319CZL7	C2H2-type domain-containing protein. (112 aa)
	A0A319D0M4	AAA-domain-containing protein. (746 aa)
	A0A319DAB9	ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (498 aa)
	A0A319DCP9	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
	A0A319DVV2	ATP-dependent RNA helicase DBP10. (948 aa)

Your Current Organism:

Aspergillus uvarum

NCBI taxonomy Id: 1448315
Other names: A. uvarum CBS 121591, Aspergillus uvarum CBS 121591

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A319BTU7	A0A319BUI4	A0A319BTU7	A0A319BUI4	Ribosome biogenesis protein Nsa2.	Noc2-domain-containing protein.	0.969
A0A319BTU7	A0A319BV19	A0A319BTU7	A0A319BV19	Ribosome biogenesis protein Nsa2.	Brix-domain-containing protein.	0.938
A0A319BTU7	A0A319BXS9	A0A319BTU7	A0A319BXS9	Ribosome biogenesis protein Nsa2.	F-box domain protein.	0.938
A0A319BTU7	A0A319BZ95	A0A319BTU7	A0A319BZ95	Ribosome biogenesis protein Nsa2.	Uncharacterized protein.	0.975
A0A319BTU7	A0A319C4W8	A0A319BTU7	A0A319C4W8	Ribosome biogenesis protein Nsa2.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.923
A0A319BTU7	A0A319C902	A0A319BTU7	A0A319C902	Ribosome biogenesis protein Nsa2.	Protein MAK16; Belongs to the MAK16 family.	0.966
A0A319BTU7	A0A319CDR0	A0A319BTU7	A0A319CDR0	Ribosome biogenesis protein Nsa2.	Uncharacterized protein.	0.901
A0A319BTU7	A0A319CE52	A0A319BTU7	A0A319CE52	Ribosome biogenesis protein Nsa2.	RRM domain-containing protein.	0.986
A0A319BTU7	A0A319CGH3	A0A319BTU7	A0A319CGH3	Ribosome biogenesis protein Nsa2.	RNA helicase.	0.972
A0A319BTU7	A0A319CIM9	A0A319BTU7	A0A319CIM9	Ribosome biogenesis protein Nsa2.	DUF1665 domain protein.	0.538
A0A319BTU7	A0A319CJJ9	A0A319BTU7	A0A319CJJ9	Ribosome biogenesis protein Nsa2.	60s ribosomal protein L30 isolog.	0.992
A0A319BTU7	A0A319CN85	A0A319BTU7	A0A319CN85	Ribosome biogenesis protein Nsa2.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.954
A0A319BTU7	A0A319CSG6	A0A319BTU7	A0A319CSG6	Ribosome biogenesis protein Nsa2.	CBF-domain-containing protein.	0.578
A0A319BTU7	A0A319CW15	A0A319BTU7	A0A319CW15	Ribosome biogenesis protein Nsa2.	P-loop containing nucleoside triphosphate hydrolase protein.	0.634
A0A319BTU7	A0A319CZB0	A0A319BTU7	A0A319CZB0	Ribosome biogenesis protein Nsa2.	RNA helicase.	0.984
A0A319BTU7	A0A319CZL7	A0A319BTU7	A0A319CZL7	Ribosome biogenesis protein Nsa2.	C2H2-type domain-containing protein.	0.970
A0A319BTU7	A0A319D0M4	A0A319BTU7	A0A319D0M4	Ribosome biogenesis protein Nsa2.	AAA-domain-containing protein.	0.839
A0A319BTU7	A0A319DAB9	A0A319BTU7	A0A319DAB9	Ribosome biogenesis protein Nsa2.	ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family.	0.852
A0A319BTU7	A0A319DCP9	A0A319BTU7	A0A319DCP9	Ribosome biogenesis protein Nsa2.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.983
A0A319BTU7	A0A319DVV2	A0A319BTU7	A0A319DVV2	Ribosome biogenesis protein Nsa2.	ATP-dependent RNA helicase DBP10.	0.843