(11 nodes) Oxysterol-binding protein, and Anoctamin network (Aspergillus ibericus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395GKK3	DUF590-domain-containing protein. (737 aa)
	A0A395GN58	Plasma membrane stress response protein. (734 aa)
	A0A395GP22	Uncharacterized protein. (251 aa)
	A0A395GQX0	Oxysterol binding protein; Belongs to the OSBP family. (474 aa)
	A0A395GSX4	Uncharacterized protein. (257 aa)
	A0A395H4D0	Oxysterol binding protein; Belongs to the OSBP family. (415 aa)
	A0A395HA59	Uncharacterized protein; Belongs to the OSBP family. (1664 aa)
	A0A395HCU7	MSP domain protein. (284 aa)
	A0A395HF97	Oxysterol-binding protein-like protein 1; Belongs to the OSBP family. (427 aa)
	A0A395HFE6	NIPSNAP family protein. (385 aa)
	A0A395HGT9	Putative oxysterol binding protein. (967 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GKK3	A0A395GP22	DUF590-domain-containing protein.	Uncharacterized protein.	0.422
A0A395GKK3	A0A395GQX0	DUF590-domain-containing protein.	Oxysterol binding protein; Belongs to the OSBP family.	0.621
A0A395GKK3	A0A395GSX4	DUF590-domain-containing protein.	Uncharacterized protein.	0.422
A0A395GKK3	A0A395H4D0	DUF590-domain-containing protein.	Oxysterol binding protein; Belongs to the OSBP family.	0.422
A0A395GKK3	A0A395HF97	DUF590-domain-containing protein.	Oxysterol-binding protein-like protein 1; Belongs to the OSBP family.	0.422
A0A395GN58	A0A395GP22	Plasma membrane stress response protein.	Uncharacterized protein.	0.422
A0A395GN58	A0A395GQX0	Plasma membrane stress response protein.	Oxysterol binding protein; Belongs to the OSBP family.	0.621
A0A395GN58	A0A395GSX4	Plasma membrane stress response protein.	Uncharacterized protein.	0.422
A0A395GN58	A0A395H4D0	Plasma membrane stress response protein.	Oxysterol binding protein; Belongs to the OSBP family.	0.422
A0A395GN58	A0A395HF97	Plasma membrane stress response protein.	Oxysterol-binding protein-like protein 1; Belongs to the OSBP family.	0.422
A0A395GP22	A0A395GKK3	Uncharacterized protein.	DUF590-domain-containing protein.	0.422
A0A395GP22	A0A395GN58	Uncharacterized protein.	Plasma membrane stress response protein.	0.422
A0A395GP22	A0A395HA59	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.581
A0A395GP22	A0A395HCU7	Uncharacterized protein.	MSP domain protein.	0.511
A0A395GP22	A0A395HFE6	Uncharacterized protein.	NIPSNAP family protein.	0.488
A0A395GP22	A0A395HGT9	Uncharacterized protein.	Putative oxysterol binding protein.	0.421
A0A395GQX0	A0A395GKK3	Oxysterol binding protein; Belongs to the OSBP family.	DUF590-domain-containing protein.	0.621
A0A395GQX0	A0A395GN58	Oxysterol binding protein; Belongs to the OSBP family.	Plasma membrane stress response protein.	0.621
A0A395GQX0	A0A395HA59	Oxysterol binding protein; Belongs to the OSBP family.	Uncharacterized protein; Belongs to the OSBP family.	0.581
A0A395GQX0	A0A395HCU7	Oxysterol binding protein; Belongs to the OSBP family.	MSP domain protein.	0.600