7 items (Aspergillus ibericus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395GPN6	DNA repair helicase. (794 aa)
	A0A395H2B8	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (452 aa)
	A0A395HA92	RNA polymerase II transcription factor B subunit 5. (72 aa)
	A0A395H4V8	DNA repair helicase rad25. (817 aa)
	A0A395GZC2	Transcription factor TFIIH complex subunit. (383 aa)
	A0A395GR28	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (432 aa)
	A0A395GQJ4	RNA polymerase II transcription factor. (626 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GPN6	A0A395GQJ4	DNA repair helicase.	RNA polymerase II transcription factor.	0.999
A0A395GPN6	A0A395GR28	DNA repair helicase.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
A0A395GPN6	A0A395GZC2	DNA repair helicase.	Transcription factor TFIIH complex subunit.	0.999
A0A395GPN6	A0A395H2B8	DNA repair helicase.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
A0A395GPN6	A0A395H4V8	DNA repair helicase.	DNA repair helicase rad25.	0.999
A0A395GPN6	A0A395HA92	DNA repair helicase.	RNA polymerase II transcription factor B subunit 5.	0.996
A0A395GQJ4	A0A395GPN6	RNA polymerase II transcription factor.	DNA repair helicase.	0.999
A0A395GQJ4	A0A395GR28	RNA polymerase II transcription factor.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
A0A395GQJ4	A0A395GZC2	RNA polymerase II transcription factor.	Transcription factor TFIIH complex subunit.	0.999
A0A395GQJ4	A0A395H2B8	RNA polymerase II transcription factor.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
A0A395GQJ4	A0A395H4V8	RNA polymerase II transcription factor.	DNA repair helicase rad25.	0.999
A0A395GQJ4	A0A395HA92	RNA polymerase II transcription factor.	RNA polymerase II transcription factor B subunit 5.	0.997
A0A395GR28	A0A395GPN6	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	DNA repair helicase.	0.999
A0A395GR28	A0A395GQJ4	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	RNA polymerase II transcription factor.	0.999
A0A395GR28	A0A395GZC2	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Transcription factor TFIIH complex subunit.	0.999
A0A395GR28	A0A395H2B8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
A0A395GR28	A0A395H4V8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	DNA repair helicase rad25.	0.999
A0A395GR28	A0A395HA92	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	RNA polymerase II transcription factor B subunit 5.	0.999
A0A395GZC2	A0A395GPN6	Transcription factor TFIIH complex subunit.	DNA repair helicase.	0.999
A0A395GZC2	A0A395GQJ4	Transcription factor TFIIH complex subunit.	RNA polymerase II transcription factor.	0.999