48 items (Aspergillus ibericus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395H9J3	Transcription initiation factor iif, beta subunit. (384 aa)
	A0A395H964	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (712 aa)
	A0A395HCP5	Uncharacterized protein. (497 aa)
	A0A395HCW2	B-block_TFIIIC domain-containing protein. (1828 aa)
	A0A395HFV8	TFIID_20kDa domain-containing protein. (615 aa)
	A0A395HGC8	Uncharacterized protein. (411 aa)
	A0A395GL71	Histone-fold-containing protein. (253 aa)
	A0A395GIQ6	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (251 aa)
	A0A395H8D3	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (294 aa)
	A0A395H7P6	Uncharacterized protein. (506 aa)
	A0A395H719	Zn(2)-C6 fungal-type domain-containing protein. (727 aa)
	A0A395H6A9	Uncharacterized protein. (639 aa)
	A0A395H5K1	Transcription elongation factor. (303 aa)
	A0A395H5C9	S-adenosyl-L-methionine-dependent methyltransferase. (618 aa)
	A0A395H5A3	Transcription factor IIIB, Bdp1 subunit. (574 aa)
	A0A395H594	RPOL9 domain-containing protein. (122 aa)
	A0A395H4V8	DNA repair helicase rad25. (817 aa)
	A0A395H4J5	WD40 repeat-like protein. (746 aa)
	A0A395H4B9	Transcription factor TFIIE complex alpha subunit. (454 aa)
	A0A395H3G9	SWIB-domain-containing protein. (285 aa)
	A0A395H3C0	RNA polymerase I-specific transcription initiation factor RRN3 superfamily. (709 aa)
	A0A395H2S4	Histone-fold-containing protein. (335 aa)
	A0A395H2I1	Transcription initiation factor TFIID complex subunit. (445 aa)
	A0A395H2H0	Transcription initiation protein. (351 aa)
	A0A395H240	Acyl_transf_3 domain-containing protein. (473 aa)
	A0A395H1A4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa)
	A0A395H129	DNA-directed rna polymerase III 25 kd polypeptide. (193 aa)
	A0A395GZW9	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (755 aa)
	A0A395GY16	HMG-box. (305 aa)
	A0A395GXF3	Transcription initiation factor TFIID subunit 13. (274 aa)
	A0A395GXA6	Uncharacterized protein. (1008 aa)
	A0A395GW81	TBP-domain-containing protein. (137 aa)
	A0A395GV39	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (274 aa)
	A0A395GSA8	Uncharacterized protein. (757 aa)
	A0A395GS47	Uncharacterized protein. (442 aa)
	A0A395H9J7	Uncharacterized protein. (427 aa)
	A0A395H9L0	DNA-directed RNA polymerase subunit E. (169 aa)
	A0A395HA11	Negative cofactor 2 complex subunit beta. (142 aa)
	A0A395HA92	RNA polymerase II transcription factor B subunit 5. (72 aa)
	A0A395HAJ2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	A0A395HAV7	Uncharacterized protein. (366 aa)
	A0A395HBH8	TFIID-31kDa-domain-containing protein. (315 aa)
	A0A395GRQ5	Uncharacterized protein. (790 aa)
	A0A395GPN6	DNA repair helicase. (794 aa)
	A0A395GNP8	Transcription factor IIIc-like protein. (557 aa)
	A0A395GLB0	Putative transcription factor TFIID complex 145 kDa subunit. (1110 aa)
	A0A395HCB8	TAFII55_N domain-containing protein. (458 aa)
	A0A395HBM7	Uncharacterized protein. (1271 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GIQ6	A0A395GS47	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Uncharacterized protein.	0.983
A0A395GIQ6	A0A395GSA8	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Uncharacterized protein.	0.929
A0A395GIQ6	A0A395GW81	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	TBP-domain-containing protein.	0.911
A0A395GIQ6	A0A395H129	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed rna polymerase III 25 kd polypeptide.	0.987
A0A395GIQ6	A0A395H1A4	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.904
A0A395GIQ6	A0A395H594	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	RPOL9 domain-containing protein.	0.806
A0A395GIQ6	A0A395H5A3	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Transcription factor IIIB, Bdp1 subunit.	0.916
A0A395GIQ6	A0A395H5K1	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Transcription elongation factor.	0.802
A0A395GIQ6	A0A395H6A9	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Uncharacterized protein.	0.771
A0A395GIQ6	A0A395H9J7	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Uncharacterized protein.	0.534
A0A395GIQ6	A0A395HBM7	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Uncharacterized protein.	0.523
A0A395GL71	A0A395GW81	Histone-fold-containing protein.	TBP-domain-containing protein.	0.981
A0A395GL71	A0A395H2H0	Histone-fold-containing protein.	Transcription initiation protein.	0.684
A0A395GL71	A0A395HA11	Histone-fold-containing protein.	Negative cofactor 2 complex subunit beta.	0.987
A0A395GL71	A0A395HBH8	Histone-fold-containing protein.	TFIID-31kDa-domain-containing protein.	0.481
A0A395GLB0	A0A395GNP8	Putative transcription factor TFIID complex 145 kDa subunit.	Transcription factor IIIc-like protein.	0.975
A0A395GLB0	A0A395GPN6	Putative transcription factor TFIID complex 145 kDa subunit.	DNA repair helicase.	0.899
A0A395GLB0	A0A395GV39	Putative transcription factor TFIID complex 145 kDa subunit.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.999
A0A395GLB0	A0A395GW81	Putative transcription factor TFIID complex 145 kDa subunit.	TBP-domain-containing protein.	0.999
A0A395GLB0	A0A395GXF3	Putative transcription factor TFIID complex 145 kDa subunit.	Transcription initiation factor TFIID subunit 13.	0.999