(4 nodes) t-UTP complex network (Aspergillus ibericus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395H9C1	Uncharacterized protein. (913 aa)
	A0A395H8A0	U3 small nucleolar RNA-associated protein 10. (1799 aa)
	A0A395GQJ3	Small nucleolar ribonucleo protein complex subunit. (956 aa)
	A0A395HIK1	Small nucleolar ribonucleo protein complex subunit Utp15. (543 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GQJ3	A0A395H8A0	Small nucleolar ribonucleo protein complex subunit.	U3 small nucleolar RNA-associated protein 10.	0.999
A0A395GQJ3	A0A395H9C1	Small nucleolar ribonucleo protein complex subunit.	Uncharacterized protein.	0.706
A0A395GQJ3	A0A395HIK1	Small nucleolar ribonucleo protein complex subunit.	Small nucleolar ribonucleo protein complex subunit Utp15.	0.999
A0A395H8A0	A0A395GQJ3	U3 small nucleolar RNA-associated protein 10.	Small nucleolar ribonucleo protein complex subunit.	0.999
A0A395H8A0	A0A395H9C1	U3 small nucleolar RNA-associated protein 10.	Uncharacterized protein.	0.673
A0A395H8A0	A0A395HIK1	U3 small nucleolar RNA-associated protein 10.	Small nucleolar ribonucleo protein complex subunit Utp15.	0.999
A0A395H9C1	A0A395GQJ3	Uncharacterized protein.	Small nucleolar ribonucleo protein complex subunit.	0.706
A0A395H9C1	A0A395H8A0	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 10.	0.673
A0A395H9C1	A0A395HIK1	Uncharacterized protein.	Small nucleolar ribonucleo protein complex subunit Utp15.	0.669
A0A395HIK1	A0A395GQJ3	Small nucleolar ribonucleo protein complex subunit Utp15.	Small nucleolar ribonucleo protein complex subunit.	0.999
A0A395HIK1	A0A395H8A0	Small nucleolar ribonucleo protein complex subunit Utp15.	U3 small nucleolar RNA-associated protein 10.	0.999
A0A395HIK1	A0A395H9C1	Small nucleolar ribonucleo protein complex subunit Utp15.	Uncharacterized protein.	0.669