39 items (Aspergillus ibericus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395GHD3	Uncharacterized protein. (57 aa)
	A0A395GHM7	Uncharacterized protein. (158 aa)
	A0A395GIR1	SnoaL-like domain-containing protein. (145 aa)
	A0A395GLA7	Uncharacterized protein. (87 aa)
	A0A395GLN8	Uncharacterized protein. (73 aa)
	A0A395GLY6	Uncharacterized protein. (58 aa)
	A0A395GMB4	Histone-like transcription factor. (188 aa)
	A0A395GQF4	Zds_C domain-containing protein. (875 aa)
	A0A395GRF1	Damage-specific DNA binding protein. (1140 aa)
	A0A395GRL1	Uncharacterized protein. (58 aa)
	A0A395GRQ6	Uncharacterized protein. (70 aa)
	A0A395GRV3	FAD/NAD(P)-binding domain-containing protein. (532 aa)
	A0A395GTN8	Uncharacterized protein. (57 aa)
	A0A395GU15	Uncharacterized protein. (120 aa)
	A0A395GVF8	Replication factor A protein 3. (126 aa)
	A0A395GVQ8	Cullin-4B; Belongs to the cullin family. (2543 aa)
	A0A395H1I9	Ubiquitin carboxyl-terminal hydrolase. (755 aa)
	A0A395H1L8	Uncharacterized protein. (61 aa)
	A0A395H281	Uncharacterized protein. (721 aa)
	A0A395H2Z3	Telomere length regulation protein Elg1. (1180 aa)
	A0A395H362	Uncharacterized protein. (197 aa)
	A0A395H375	Ubiquitin-40S ribosomal protein S31 fusion protein. (154 aa)
	A0A395H3V7	Pkinase-domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (2129 aa)
	A0A395H4K6	TPR domain protein. (471 aa)
	A0A395H565	Uncharacterized protein. (920 aa)
	A0A395H970	Uncharacterized protein. (444 aa)
	A0A395H9V1	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	A0A395H9W0	WD40 repeat-like protein. (707 aa)
	A0A395HAB6	Uncharacterized protein. (195 aa)
	A0A395HAK5	Postreplication repair E3 ubiquitin-protein ligase rad18. (412 aa)
	A0A395HAT5	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (604 aa)
	A0A395HB43	Uncharacterized protein. (92 aa)
	A0A395HBH1	Uncharacterized protein. (81 aa)
	A0A395HBN3	Uncharacterized protein. (64 aa)
	A0A395HBZ1	Uncharacterized protein. (79 aa)
	A0A395HCF2	RING/U-box. (119 aa)
	A0A395HD45	Reverse transcriptase domain-containing protein. (60 aa)
	A0A395HDY3	BZIP domain-containing protein. (252 aa)
	A0A395HJ71	Putative retrotransposon poly protein. (79 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GHD3	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GHM7	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GIR1	A0A395HAT5	SnoaL-like domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GLA7	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GLN8	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GLY6	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GQF4	A0A395HAT5	Zds_C domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GRF1	A0A395GVQ8	Damage-specific DNA binding protein.	Cullin-4B; Belongs to the cullin family.	0.999
A0A395GRF1	A0A395H1I9	Damage-specific DNA binding protein.	Ubiquitin carboxyl-terminal hydrolase.	0.624
A0A395GRF1	A0A395H375	Damage-specific DNA binding protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.797
A0A395GRF1	A0A395H3V7	Damage-specific DNA binding protein.	Pkinase-domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.724
A0A395GRF1	A0A395H9V1	Damage-specific DNA binding protein.	Putative ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.838
A0A395GRF1	A0A395H9W0	Damage-specific DNA binding protein.	WD40 repeat-like protein.	0.998
A0A395GRF1	A0A395HAK5	Damage-specific DNA binding protein.	Postreplication repair E3 ubiquitin-protein ligase rad18.	0.788
A0A395GRF1	A0A395HAT5	Damage-specific DNA binding protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.691
A0A395GRF1	A0A395HCF2	Damage-specific DNA binding protein.	RING/U-box.	0.998
A0A395GRF1	A0A395HDY3	Damage-specific DNA binding protein.	BZIP domain-containing protein.	0.797
A0A395GRL1	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GRQ6	A0A395HAT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690
A0A395GRV3	A0A395HAT5	FAD/NAD(P)-binding domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.690