8 items (Aspergillus ibericus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395GZK0	HMG box protein. (498 aa)
	A0A395H7N8	HMG box protein. (692 aa)
	A0A395HFH3	Mating-type HMG-box protein MAT1-2. (338 aa)
	A0A395HDY3	BZIP domain-containing protein. (252 aa)
	A0A395H8W4	Uncharacterized protein. (353 aa)
	A0A395GZA5	Uncharacterized protein. (465 aa)
	A0A395GMX2	C2H2 finger domain protein. (619 aa)
	A0A395H375	Ubiquitin-40S ribosomal protein S31 fusion protein. (154 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GMX2	A0A395GZK0	C2H2 finger domain protein.	HMG box protein.	0.567
A0A395GZA5	A0A395GZK0	Uncharacterized protein.	HMG box protein.	0.567
A0A395GZK0	A0A395GMX2	HMG box protein.	C2H2 finger domain protein.	0.567
A0A395GZK0	A0A395GZA5	HMG box protein.	Uncharacterized protein.	0.567
A0A395GZK0	A0A395H7N8	HMG box protein.	HMG box protein.	0.567
A0A395GZK0	A0A395H8W4	HMG box protein.	Uncharacterized protein.	0.567
A0A395GZK0	A0A395HFH3	HMG box protein.	Mating-type HMG-box protein MAT1-2.	0.567
A0A395H7N8	A0A395GZK0	HMG box protein.	HMG box protein.	0.567
A0A395H8W4	A0A395GZK0	Uncharacterized protein.	HMG box protein.	0.567
A0A395HFH3	A0A395GZK0	Mating-type HMG-box protein MAT1-2.	HMG box protein.	0.567