12 items (Aspergillus ibericus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395GYI0	Uncharacterized protein. (162 aa)
	A0A395GY95	Uncharacterized protein. (446 aa)
	A0A395GVV7	TRAUB-domain-containing protein. (555 aa)
	A0A395GT19	SH3 domain-containing protein. (690 aa)
	A0A395GM21	Uncharacterized protein. (173 aa)
	A0A395GKN3	AB hydrolase-1 domain-containing protein. (391 aa)
	A0A395HEV3	Cell division control protein 42. (199 aa)
	BO80DRAFT_451	CNH-domain-containing protein. (1197 aa)
	A0A395HDY3	BZIP domain-containing protein. (252 aa)
	A0A395HC50	Uncharacterized protein. (425 aa)
	A0A395H375	Ubiquitin-40S ribosomal protein S31 fusion protein. (154 aa)
	A0A395H1Q3	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer. (800 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A395GKN3	A0A395GM21	A0A395GKN3	A0A395GM21	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.634
A0A395GKN3	A0A395HEV3	A0A395GKN3	A0A395HEV3	AB hydrolase-1 domain-containing protein.	Cell division control protein 42.	0.510
A0A395GM21	A0A395GKN3	A0A395GM21	A0A395GKN3	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.634
A0A395GM21	A0A395GT19	A0A395GM21	A0A395GT19	Uncharacterized protein.	SH3 domain-containing protein.	0.788
A0A395GM21	A0A395GY95	A0A395GM21	A0A395GY95	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A395GM21	A0A395GYI0	A0A395GM21	A0A395GYI0	Uncharacterized protein.	Uncharacterized protein.	0.634
A0A395GM21	A0A395H375	A0A395GM21	A0A395H375	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.566
A0A395GM21	A0A395HDY3	A0A395GM21	A0A395HDY3	Uncharacterized protein.	BZIP domain-containing protein.	0.566
A0A395GM21	A0A395HEV3	A0A395GM21	A0A395HEV3	Uncharacterized protein.	Cell division control protein 42.	0.859
A0A395GT19	A0A395GM21	A0A395GT19	A0A395GM21	SH3 domain-containing protein.	Uncharacterized protein.	0.788
A0A395GT19	A0A395HEV3	A0A395GT19	A0A395HEV3	SH3 domain-containing protein.	Cell division control protein 42.	0.951
A0A395GVV7	A0A395H375	A0A395GVV7	A0A395H375	TRAUB-domain-containing protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.565
A0A395GVV7	A0A395HDY3	A0A395GVV7	A0A395HDY3	TRAUB-domain-containing protein.	BZIP domain-containing protein.	0.565
A0A395GY95	A0A395GM21	A0A395GY95	A0A395GM21	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A395GY95	A0A395HEV3	A0A395GY95	A0A395HEV3	Uncharacterized protein.	Cell division control protein 42.	0.951
A0A395GYI0	A0A395GM21	A0A395GYI0	A0A395GM21	Uncharacterized protein.	Uncharacterized protein.	0.634
A0A395GYI0	A0A395HEV3	A0A395GYI0	A0A395HEV3	Uncharacterized protein.	Cell division control protein 42.	0.510
A0A395H1Q3	A0A395H375	A0A395H1Q3	A0A395H375	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.985
A0A395H1Q3	A0A395HC50	A0A395H1Q3	A0A395HC50	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	Uncharacterized protein.	0.520
A0A395H1Q3	A0A395HDY3	A0A395H1Q3	A0A395HDY3	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.	BZIP domain-containing protein.	0.985