11 items (Aspergillus ibericus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395HA69	Metallophos domain-containing protein. (655 aa)
	A0A395HCF2	RING/U-box. (119 aa)
	A0A395HDY3	BZIP domain-containing protein. (252 aa)
	A0A395H676	Kinase-like protein. (481 aa)
	A0A395H375	Ubiquitin-40S ribosomal protein S31 fusion protein. (154 aa)
	A0A395H317	Lignostilbene dioxygenase. (499 aa)
	A0A395GZ91	Uncharacterized protein. (102 aa)
	A0A395GYF8	Uncharacterized protein. (568 aa)
	A0A395HE36	Kinase-like protein; Belongs to the protein kinase superfamily. (395 aa)
	A0A395HF49	F-box domain-containing protein. (387 aa)
	A0A395H8Y1	9-cis-epoxycarotenoid dioxygenase. (596 aa)

Your Current Organism:

Aspergillus ibericus

NCBI taxonomy Id: 1448316
Other names: A. ibericus CBS 121593, Aspergillus ibericus CBS 121593

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395GYF8	A0A395GZ91	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A395GZ91	A0A395GYF8	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A395GZ91	A0A395H317	Uncharacterized protein.	Lignostilbene dioxygenase.	0.464
A0A395GZ91	A0A395H375	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.795
A0A395GZ91	A0A395H676	Uncharacterized protein.	Kinase-like protein.	0.626
A0A395GZ91	A0A395H8Y1	Uncharacterized protein.	9-cis-epoxycarotenoid dioxygenase.	0.464
A0A395GZ91	A0A395HA69	Uncharacterized protein.	Metallophos domain-containing protein.	0.422
A0A395GZ91	A0A395HCF2	Uncharacterized protein.	RING/U-box.	0.951
A0A395GZ91	A0A395HDY3	Uncharacterized protein.	BZIP domain-containing protein.	0.795
A0A395GZ91	A0A395HE36	Uncharacterized protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.626
A0A395GZ91	A0A395HF49	Uncharacterized protein.	F-box domain-containing protein.	0.422
A0A395H317	A0A395GZ91	Lignostilbene dioxygenase.	Uncharacterized protein.	0.464
A0A395H375	A0A395GZ91	Ubiquitin-40S ribosomal protein S31 fusion protein.	Uncharacterized protein.	0.795
A0A395H375	A0A395H676	Ubiquitin-40S ribosomal protein S31 fusion protein.	Kinase-like protein.	0.614
A0A395H375	A0A395HCF2	Ubiquitin-40S ribosomal protein S31 fusion protein.	RING/U-box.	0.917
A0A395H375	A0A395HE36	Ubiquitin-40S ribosomal protein S31 fusion protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.614
A0A395H676	A0A395GZ91	Kinase-like protein.	Uncharacterized protein.	0.626
A0A395H676	A0A395H375	Kinase-like protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.614
A0A395H676	A0A395HCF2	Kinase-like protein.	RING/U-box.	0.663
A0A395H676	A0A395HDY3	Kinase-like protein.	BZIP domain-containing protein.	0.614