STRINGSTRING
ETX12028.1 ETX12028.1 ETX16379.1 ETX16379.1 ETX16380.1 ETX16380.1 ETX16381.1 ETX16381.1 ETX16432.1 ETX16432.1 ETX16433.1 ETX16433.1 ETX16453.1 ETX16453.1 ETX16598.1 ETX16598.1 ETX16599.1 ETX16599.1 ppk ppk ETX14470.1 ETX14470.1 nuoA nuoA nuoB nuoB nuoC nuoC nuoD nuoD ETX14523.1 ETX14523.1 ETX14524.1 ETX14524.1 ETX14529.1 ETX14529.1 nuoH nuoH nuoI nuoI ETX14534.1 ETX14534.1 nuoK nuoK ETX14536.1 ETX14536.1 ETX14537.1 ETX14537.1 nuoN nuoN ETX14327.1 ETX14327.1 ETX14257.1 ETX14257.1 ETX14258.1 ETX14258.1 ETX14259.1 ETX14259.1 ETX14260.1 ETX14260.1 ETX13853.1 ETX13853.1 ETX13854.1 ETX13854.1 rbfA rbfA ETX16086.1 ETX16086.1 ETX16089.1 ETX16089.1 ctaG ctaG ctaB ctaB ETX16093.1 ETX16093.1 ETX15772.1 ETX15772.1 ETX15773.1 ETX15773.1 ETX15774.1 ETX15774.1 ETX15775.1 ETX15775.1 ETX15814.1 ETX15814.1 ETX15818.1 ETX15818.1 ETX15819.1 ETX15819.1 ETX15820.1 ETX15820.1 ETX15821.1 ETX15821.1 ETX15955.1 ETX15955.1 ETX13221.1 ETX13221.1 ctaA ctaA atpB atpB atpE atpE atpF atpF atpF-2 atpF-2 ETX15398.1 ETX15398.1 sdhB sdhB ETX15107.1 ETX15107.1 ETX15108.1 ETX15108.1 ETX15109.1 ETX15109.1 ETX15234.1 ETX15234.1 ETX15235.1 ETX15235.1 ETX15236.1 ETX15236.1 ETX11985.1 ETX11985.1 ETX11986.1 ETX11986.1 atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ETX12028.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (351 aa)
ETX16379.1Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. (952 aa)
ETX16380.1Cation:proton antiporter; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
ETX16381.1Cation:proton antiporter; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology. (559 aa)
ETX16432.1Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
ETX16433.1Ubiquinol oxidase subunit II, cyanide insensitive; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
ETX16453.1UDP-galactose-lipid carrier transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
ETX16598.1Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (835 aa)
ETX16599.1Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (727 aa)
ETX14470.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa)
nuoANADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (121 aa)
nuoBNADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (177 aa)
nuoCNADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (204 aa)
nuoDNADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (407 aa)
ETX14523.1ATP synthase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
ETX14524.1ATP synthase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
ETX14529.1NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (677 aa)
nuoHNADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (345 aa)
nuoINADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (164 aa)
ETX14534.1NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (200 aa)
nuoKNADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
ETX14536.1NADH:ubiquinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
ETX14537.1NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
nuoNNADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (480 aa)
ETX14327.1Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (557 aa)
ETX14257.1NADH-ubiquinone oxidoreductase subunit 4L; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
ETX14258.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
ETX14259.1NADH dehydrogenase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
ETX14260.1Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
ETX13853.1Zinc protease; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M16 family. (472 aa)
ETX13854.1Zinc protease; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (444 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (131 aa)
ETX16086.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family. (420 aa)
ETX16089.1Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
ctaGCytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (196 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. (314 aa)
ETX16093.1Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (298 aa)
ETX15772.1Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
ETX15773.1Cytochrome O ubiquinol oxidase; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
ETX15774.1Cytochrome O ubiquinol oxidase; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)
ETX15775.1Cytochrome O ubiquinol oxidase; Overlaps another CDS with the same product name; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
ETX15814.1Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)
ETX15818.1Cytochrome CBB3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (290 aa)
ETX15819.1Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)
ETX15820.1Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
ETX15821.1Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (535 aa)
ETX15955.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (177 aa)
ETX13221.1Transmembrane exosortase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (458 aa)
ctaAHeme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (384 aa)
atpBF0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (260 aa)
atpEF0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (74 aa)
atpFF0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (184 aa)
atpF-2F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (185 aa)
ETX15398.1Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ETX15107.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (601 aa)
ETX15108.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
ETX15109.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
ETX15234.1Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
ETX15235.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (448 aa)
ETX15236.1Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (187 aa)
ETX11985.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0753 family. (772 aa)
ETX11986.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (521 aa)
atpCF0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (145 aa)
atpDF0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (474 aa)
atpGF0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (296 aa)
atpAF0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (512 aa)
atpHF0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (188 aa)
Your Current Organism:
Roseivivax halodurans
NCBI taxonomy Id: 1449350
Other names: R. halodurans JCM 10272, Roseivivax halodurans JCM 10272
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