STRINGSTRING
KALB_996 KALB_996 KALB_100 KALB_100 KALB_1056 KALB_1056 KALB_1069 KALB_1069 lysS lysS KALB_1142 KALB_1142 KALB_117 KALB_117 KALB_121 KALB_121 KALB_1256 KALB_1256 rph rph KALB_1288 KALB_1288 KALB_1295 KALB_1295 orn orn serS serS glyS glyS KALB_1436 KALB_1436 proS proS KALB_1565 KALB_1565 valS valS valS-2 valS-2 KALB_1593 KALB_1593 KALB_1606 KALB_1606 KALB_1670 KALB_1670 KALB_1690 KALB_1690 ybeY ybeY glyQS glyQS KALB_1728 KALB_1728 dnaG dnaG KALB_1795 KALB_1795 KALB_1825 KALB_1825 KALB_1826 KALB_1826 KALB_1912 KALB_1912 KALB_1930 KALB_1930 KALB_1993 KALB_1993 tadA tadA KALB_2146 KALB_2146 KALB_2157 KALB_2157 KALB_216 KALB_216 KALB_2307 KALB_2307 KALB_2334 KALB_2334 KALB_2339 KALB_2339 KALB_2374 KALB_2374 thrS thrS vapC vapC KALB_2499 KALB_2499 KALB_2501 KALB_2501 KALB_2564 KALB_2564 KALB_2636 KALB_2636 aspS aspS alaS alaS KALB_2713 KALB_2713 KALB_2734 KALB_2734 nusB nusB rpoZ rpoZ KALB_2772 KALB_2772 fmt fmt KALB_2776 KALB_2776 KALB_2815 KALB_2815 KALB_302 KALB_302 KALB_3034 KALB_3034 KALB_3128 KALB_3128 KALB_3159 KALB_3159 KALB_3225 KALB_3225 KALB_3237 KALB_3237 KALB_3279 KALB_3279 KALB_3332 KALB_3332 KALB_3449 KALB_3449 tilS tilS KALB_3621 KALB_3621 KALB_3658 KALB_3658 KALB_3781 KALB_3781 lysS-2 lysS-2 KALB_3790 KALB_3790 KALB_3811 KALB_3811 KALB_4011 KALB_4011 KALB_420 KALB_420 cysS cysS KALB_428 KALB_428 KALB_4281 KALB_4281 KALB_4297 KALB_4297 KALB_4302 KALB_4302 KALB_431 KALB_431 KALB_4311 KALB_4311 KALB_4384 KALB_4384 KALB_4411 KALB_4411 KALB_4435 KALB_4435 KALB_4462 KALB_4462 KALB_4469 KALB_4469 KALB_4512 KALB_4512 KALB_4595 KALB_4595 rho rho KALB_4687 KALB_4687 KALB_4717 KALB_4717 KALB_4748 KALB_4748 KALB_4794 KALB_4794 KALB_5230 KALB_5230 KALB_5240 KALB_5240 KALB_5246 KALB_5246 KALB_525 KALB_525 KALB_5262 KALB_5262 KALB_5417 KALB_5417 KALB_5491 KALB_5491 KALB_5500 KALB_5500 KALB_5678 KALB_5678 gltX gltX KALB_5680 KALB_5680 KALB_5744 KALB_5744 KALB_5819 KALB_5819 KALB_5858 KALB_5858 KALB_592 KALB_592 KALB_5947 KALB_5947 KALB_6166 KALB_6166 rnz rnz argS argS KALB_6280 KALB_6280 KALB_6337 KALB_6337 KALB_6368 KALB_6368 KALB_6376 KALB_6376 KALB_6428 KALB_6428 tyrS tyrS pheT pheT pheS pheS KALB_6469 KALB_6469 KALB_6491 KALB_6491 KALB_6532 KALB_6532 acuX1 acuX1 KALB_6592 KALB_6592 vapC-2 vapC-2 KALB_665 KALB_665 vapC-3 vapC-3 miaA miaA miaB miaB KALB_6715 KALB_6715 KALB_6725 KALB_6725 vapC-4 vapC-4 KALB_6831 KALB_6831 KALB_6835 KALB_6835 sigA sigA psuG psuG dtd dtd KALB_6862 KALB_6862 KALB_6876 KALB_6876 KALB_6901 KALB_6901 KALB_6934 KALB_6934 kptA kptA KALB_7094 KALB_7094 ileS ileS rsmH rsmH rimO rimO rnj rnj pnp pnp truB truB rbfA rbfA nusA nusA KALB_7224 KALB_7224 rlmN rlmN KALB_7302 KALB_7302 rnhB rnhB trmD trmD rimM rimM KALB_7336 KALB_7336 rnc rnc KALB_7357 KALB_7357 KALB_7358 KALB_7358 KALB_7360 KALB_7360 KALB_7404 KALB_7404 mnmA mnmA KALB_7495 KALB_7495 KALB_7516 KALB_7516 KALB_7528 KALB_7528 KALB_755 KALB_755 KALB_756 KALB_756 KALB_7562 KALB_7562 vapC-5 vapC-5 KALB_7616 KALB_7616 rho-2 rho-2 argS-2 argS-2 rsmI rsmI metG metG KALB_7762 KALB_7762 rsmA rsmA KALB_7870 KALB_7870 KALB_7871 KALB_7871 KALB_7876 KALB_7876 KALB_7881 KALB_7881 KALB_7898 KALB_7898 KALB_7945 KALB_7945 KALB_7962 KALB_7962 KALB_8096 KALB_8096 KALB_8122 KALB_8122 KALB_8151 KALB_8151 tsaD tsaD KALB_8164 KALB_8164 KALB_8166 KALB_8166 truA truA rpoA rpoA rpoC rpoC rpoB rpoB nusG nusG KALB_8357 KALB_8357 KALB_8393 KALB_8393 KALB_8412 KALB_8412 KALB_8479 KALB_8479 KALB_8500 KALB_8500 KALB_8574 KALB_8574 KALB_8613 KALB_8613 KALB_8641 KALB_8641 trmB trmB vapC-6 vapC-6 KALB_8763 KALB_8763 leuS leuS KALB_8820 KALB_8820 KALB_8825 KALB_8825 rsmG rsmG KALB_8840 KALB_8840 KALB_89 KALB_89 KALB_919 KALB_919 KALB_936 KALB_936 KALB_949 KALB_949 KALB_958 KALB_958 KALB_990 KALB_990
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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KALB_996DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. (565 aa)
KALB_100RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
KALB_1056Hypothetical protein. (361 aa)
KALB_1069Ribonuclease R. (476 aa)
lysSLysylphosphatidylglycerol biosynthesis bifunctional protein LysX; Catalyzes the production of L-lysyl-tRNA(Lys)transfer and the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), one of the components of the bacterial membrane with a positive net charge. LPG synthesis contributes to the resistance to cationic antimicrobial peptides (CAMPs) and likely protects M.tuberculosis against the CAMPs produced by competiting microorganisms (bacteriocins). In fact, the modification of anionic phosphatidylgl [...] (1113 aa)
KALB_1142ATP-dependent helicase HrpB. (810 aa)
KALB_117Hypothetical protein. (460 aa)
KALB_121Hypothetical protein. (253 aa)
KALB_1256Hypothetical protein. (256 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (263 aa)
KALB_1288RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
KALB_1295RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)
ornOligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. (203 aa)
serSSeryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (421 aa)
glySGlycyl-tRNA synthetase 2. (993 aa)
KALB_1436Mycinamicin-resistance protein myrB; Confers resistance to macrolide, lincosamide and streptogramin B antibiotics; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (294 aa)
proSProlyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] (582 aa)
KALB_1565Formyltransferase. (315 aa)
valSValyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (877 aa)
valS-2Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner. (828 aa)
KALB_1593Hypothetical protein. (141 aa)
KALB_1606Ribonuclease, Rne/Rng family. (912 aa)
KALB_1670Putative secreted protein. (154 aa)
KALB_1690Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (244 aa)
ybeYPutative rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (188 aa)
glyQSGlycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (465 aa)
KALB_1728RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family. (302 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (631 aa)
KALB_1795Hypothetical protein; Belongs to the sigma-70 factor family. (171 aa)
KALB_1825RNA polymerase sigma-70 factor family protein; Belongs to the sigma-70 factor family. ECF subfamily. (329 aa)
KALB_1826Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (352 aa)
KALB_1912Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (434 aa)
KALB_1930Putative secreted protein. (373 aa)
KALB_1993Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (167 aa)
tadACytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (151 aa)
KALB_2146RNA polymerase sigma factor SigC-like protein; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)
KALB_2157RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (205 aa)
KALB_216DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa)
KALB_2307Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (413 aa)
KALB_2334RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (226 aa)
KALB_2339UBA/THIF-type NAD/FAD binding protein. (629 aa)
KALB_2374Metal-dependent phosphohydrolase HD sub domain protein. (229 aa)
thrSThreonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (683 aa)
vapCHypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (144 aa)
KALB_2499Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (213 aa)
KALB_25014Fe-4S ferredoxin, iron-sulfur binding protein. (344 aa)
KALB_2564Threonyl-tRNA synthetase. (405 aa)
KALB_2636RNA polymerase sigma-70 factor, ECF subfamily. (190 aa)
aspSAspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (595 aa)
alaSAlanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (887 aa)
KALB_2713Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (172 aa)
KALB_2734ECF subfamily RNA polymerase sigma-24 factor; DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. ECF subfamily. (201 aa)
nusBN utilization substance B-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (139 aa)
rpoZHypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (95 aa)
KALB_2772Putative primosomal protein N; Recognizes a specific hairpin sequence on phiX ssDNA. This structure is then recognized and bound by proteins priB and priC. Formation of the primosome proceeds with the subsequent actions of dnaB, dnaC, dnaT and primase. PriA then functions as a helicase within the primosome (By similarity). (624 aa)
fmtMethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (308 aa)
KALB_2776May act as RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (480 aa)
KALB_2815Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (241 aa)
KALB_302Secreted protein. (499 aa)
KALB_3034tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (281 aa)
KALB_3128Putative secreted protein. (285 aa)
KALB_3159Putative sigma factor; Belongs to the sigma-70 factor family. (304 aa)
KALB_3225Sigma factor, sigma 70 type, group 4 (ECF); DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. (313 aa)
KALB_3237DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KALB_3279Phenylacetic acid degradation operon negative regulatory protein PaaX. (275 aa)
KALB_3332RNA polymerase principal sigma factor hrdC; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (319 aa)
KALB_3449Phenylacetic acid-responsive transcription repressor. (297 aa)
tilStRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (321 aa)
KALB_3621Hypothetical protein. (133 aa)
KALB_3658Hypothetical protein. (208 aa)
KALB_3781phenylalanyl-tRNA synthetase, alpha subunit. (369 aa)
lysS-2Lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (474 aa)
KALB_3790Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity). (490 aa)
KALB_3811Metal dependent phosphohydrolase. (212 aa)
KALB_4011Hypothetical protein; Belongs to the sigma-70 factor family. (381 aa)
KALB_420Putative tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (322 aa)
cysSCysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (463 aa)
KALB_428CarD family transcription regulator. (162 aa)
KALB_4281Hypothetical protein; Belongs to the sigma-70 factor family. (407 aa)
KALB_4297Hypothetical protein. (267 aa)
KALB_4302Hypothetical protein. (398 aa)
KALB_431Hypothetical protein. (232 aa)
KALB_4311Hypothetical protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (472 aa)
KALB_4384Hypothetical protein. (269 aa)
KALB_4411Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (478 aa)
KALB_4435Hypothetical protein. (268 aa)
KALB_4462Hypothetical protein. (918 aa)
KALB_4469Hypothetical protein. (163 aa)
KALB_4512Hypothetical protein. (160 aa)
KALB_4595Hypothetical protein. (117 aa)
rhoHypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (373 aa)
KALB_4687Hypothetical protein; Belongs to the sigma-70 factor family. (123 aa)
KALB_4717Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
KALB_4748Hypothetical protein. (268 aa)
KALB_4794Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (320 aa)
KALB_5230Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (278 aa)
KALB_5240Hypothetical protein. (572 aa)
KALB_5246Hypothetical protein. (398 aa)
KALB_525RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)
KALB_5262Hypothetical protein. (270 aa)
KALB_5417Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
KALB_5491Hypothetical protein; Belongs to the sigma-70 factor family. (413 aa)
KALB_5500Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (168 aa)
KALB_5678Hypothetical protein. (127 aa)
gltXHypothetical protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (525 aa)
KALB_5680Hypothetical protein. (202 aa)
KALB_5744Hypothetical protein; Belongs to the sigma-70 factor family. (294 aa)
KALB_5819Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (170 aa)
KALB_5858Hypothetical protein. (109 aa)
KALB_592Putative tRNA/rRNA methyltransferase. (267 aa)
KALB_5947Hypothetical protein. (179 aa)
KALB_6166Hypothetical protein; Belongs to the SUA5 family. (206 aa)
rnzHypothetical protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (304 aa)
argSHypothetical protein. (580 aa)
KALB_6280Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (581 aa)
KALB_6337Hypothetical protein. (311 aa)
KALB_6368Hypothetical protein. (1308 aa)
KALB_6376Hypothetical protein; Belongs to the sigma-70 factor family. (255 aa)
KALB_6428Hypothetical protein; Belongs to the pseudouridine synthase RsuA family. (256 aa)
tyrSHypothetical protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (424 aa)
pheTHypothetical protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (826 aa)
pheSHypothetical protein; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (355 aa)
KALB_6469Hypothetical protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (236 aa)
KALB_6491Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (227 aa)
KALB_6532Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (128 aa)
acuX1AcuX1; Belongs to the class-I aminoacyl-tRNA synthetase family. (566 aa)
KALB_6592Hypothetical protein; Belongs to the class-II aminoacyl-tRNA synthetase family. (421 aa)
vapC-2Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)
KALB_665Hypothetical protein. (274 aa)
vapC-3Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)
miaAHypothetical protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (294 aa)
miaBHypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (489 aa)
KALB_6715Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (214 aa)
KALB_6725Hypothetical protein. (168 aa)
vapC-4Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (132 aa)
KALB_6831Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (398 aa)
KALB_6835Hypothetical protein. (388 aa)
sigAHypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (447 aa)
psuGHypothetical protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (309 aa)
dtdHypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (141 aa)
KALB_6862Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (323 aa)
KALB_6876Hypothetical protein. (392 aa)
KALB_6901Hypothetical protein. (707 aa)
KALB_6934Hypothetical protein. (51 aa)
kptAHypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (187 aa)
KALB_7094Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (309 aa)
ileSHypothetical protein; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1040 aa)
rsmHHypothetical protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (324 aa)
rimOHypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (477 aa)
rnjHypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (565 aa)
pnpHypothetical protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (745 aa)
truBHypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (284 aa)
rbfAHypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (152 aa)
nusAHypothetical protein; Participates in both transcription termination and antitermination. (341 aa)
KALB_7224Hypothetical protein. (541 aa)
rlmNHypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (368 aa)
KALB_7302Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (328 aa)
rnhBHypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (262 aa)
trmDHypothetical protein; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (253 aa)
rimMHypothetical protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (172 aa)
KALB_7336Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
rncHypothetical protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (250 aa)
KALB_7357Hypothetical protein. (146 aa)
KALB_7358Hypothetical protein. (140 aa)
KALB_7360Hypothetical protein. (183 aa)
KALB_7404Hypothetical protein. (93 aa)
mnmAHypothetical protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (360 aa)
KALB_7495Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
KALB_7516Hypothetical protein; Belongs to the sigma-70 factor family. (290 aa)
KALB_7528Hypothetical protein; Belongs to the sigma-70 factor family. (282 aa)
KALB_755Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (203 aa)
KALB_756Putative membrane protein. (298 aa)
KALB_7562Hypothetical protein. (104 aa)
vapC-5Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (132 aa)
KALB_7616Hypothetical protein; Belongs to the SUA5 family. (215 aa)
rho-2Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (678 aa)
argS-2Hypothetical protein. (558 aa)
rsmIRibosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (287 aa)
metGMethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (597 aa)
KALB_7762Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
rsmARibosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (284 aa)
KALB_7870Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (208 aa)
KALB_7871Hypothetical protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (159 aa)
KALB_7876Hypothetical protein; Specifically methylates the N7 position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides. (268 aa)
KALB_7881Hypothetical protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (271 aa)
KALB_7898Hypothetical protein. (743 aa)
KALB_7945Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (749 aa)
KALB_7962Hypothetical protein. (114 aa)
KALB_8096Hypothetical protein; Belongs to the sigma-70 factor family. (411 aa)
KALB_8122Hypothetical protein. (758 aa)
KALB_8151Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (190 aa)
tsaDHypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (351 aa)
KALB_8164Hypothetical protein. (234 aa)
KALB_8166Hypothetical protein. (153 aa)
truAHypothetical protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (283 aa)
rpoAHypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (352 aa)
rpoCHypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1299 aa)
rpoBHypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1160 aa)
nusGHypothetical protein; Participates in transcription elongation, termination and antitermination. (284 aa)
KALB_8357Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa)
KALB_8393Hypothetical protein. (184 aa)
KALB_8412Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
KALB_8479Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
KALB_8500Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (377 aa)
KALB_8574Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
KALB_8613Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)
KALB_8641Hypothetical protein. (238 aa)
trmBHypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (238 aa)
vapC-6Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (142 aa)
KALB_8763Hypothetical protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (453 aa)
leuSHypothetical protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (947 aa)
KALB_8820Hypothetical protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (512 aa)
KALB_8825Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
rsmGHypothetical protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (228 aa)
KALB_8840Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (97 aa)
KALB_89Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (509 aa)
KALB_919Tryptophanyl-tRNA synthetase 2; Belongs to the class-I aminoacyl-tRNA synthetase family. (321 aa)
KALB_936Cytosine deaminase. (171 aa)
KALB_949PaaX family transcription regulator. (257 aa)
KALB_958RNA polymerase sigma-70 factor, ECF subfamily. (195 aa)
KALB_990Phosphotransferase domain-containing protein. (286 aa)
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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