STRINGSTRING
prcA prcA KALB_337 KALB_337 KALB_3521 KALB_3521 KALB_4091 KALB_4091 KALB_4189 KALB_4189 rpoA rpoA KALB_4192 KALB_4192 KALB_4325 KALB_4325 KALB_4389 KALB_4389 KALB_4863 KALB_4863 KALB_581 KALB_581 KALB_6756 KALB_6756 KALB_6792 KALB_6792 xseB xseB gatA gatA rpoC rpoC KALB_117 KALB_117 xseA xseA KALB_1219 KALB_1219 clpX clpX KALB_1635 KALB_1635 rpoB rpoB KALB_169 KALB_169 dnaG dnaG KALB_2 KALB_2 dnaX dnaX KALB_2727 KALB_2727 rpoZ rpoZ recD2 recD2 KALB_301 KALB_301 arc arc prcB prcB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prcAProteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (245 aa)
KALB_337DNA polymerase III, delta' subunit; ATPase involved in DNA replication. (398 aa)
KALB_35214'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (216 aa)
KALB_4091Hypothetical protein; Belongs to the amidase family. (477 aa)
KALB_4189Hypothetical protein. (115 aa)
rpoAHypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (352 aa)
KALB_4192Hypothetical protein. (228 aa)
KALB_4325Hypothetical protein; Belongs to the amidase family. (483 aa)
KALB_4389Hypothetical protein. (264 aa)
KALB_4863Hypothetical protein. (389 aa)
KALB_581Glutamine cyclotransferase. (248 aa)
KALB_6756Hypothetical protein. (193 aa)
KALB_6792Hypothetical protein. (250 aa)
xseBHypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (76 aa)
gatAHypothetical protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (506 aa)
rpoCHypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1299 aa)
KALB_117Hypothetical protein. (460 aa)
xseAExodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (416 aa)
KALB_1219Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (220 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (426 aa)
KALB_1635Hypothetical protein; DNA polymerase III, delta subunit. (326 aa)
rpoBHypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1160 aa)
KALB_169Hypothetical protein. (185 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (631 aa)
KALB_2DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (378 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (700 aa)
KALB_2727glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A); Belongs to the amidase family. (488 aa)
rpoZHypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (95 aa)
recD2Exodeoxyribonuclease V, alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (735 aa)
KALB_301DNA polymerase III subunit beta. (363 aa)
arcProteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (597 aa)
prcBProteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (278 aa)
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.