29 items (Aspergillus sclerotioniger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317XH72	PHD domain-containing protein. (610 aa)
	A0A317V0S2	YL1-domain-containing protein. (760 aa)
	A0A317V5E6	HIT-type domain-containing protein. (319 aa)
	A0A317V8Z1	Actin family protein; Belongs to the actin family. (402 aa)
	A0A317VHC7	Hist_deacetyl domain-containing protein. (682 aa)
	A0A317VTS6	Uncharacterized protein. (233 aa)
	A0A317VW83	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (484 aa)
	A0A317VWK8	SNF2 family helicase/ATPase. (1712 aa)
	A0A317W367	Uncharacterized protein. (508 aa)
	A0A317W9P4	RXT2_N domain-containing protein. (538 aa)
	A0A317WD63	Uncharacterized protein. (284 aa)
	A0A317WI14	SET domain-containing protein. (931 aa)
	A0A317WJU7	Chromatin modification-related protein. (861 aa)
	A0A317WL56	PHD finger domain protein. (874 aa)
	A0A317WNE2	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa)
	A0A317WPT3	Histone H2A; Belongs to the histone H2A family. (138 aa)
	A0A317WPX1	Yeats-domain-containing protein. (258 aa)
	A0A317WQR7	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (800 aa)
	A0A317WQT2	Chromatin modification-related protein eaf3. (330 aa)
	A0A317WSI6	Rxt3-domain-containing protein. (1049 aa)
	A0A317WUT3	PAPA-1 domain-containing protein. (386 aa)
	A0A317X470	Chromatin modification-related protein. (631 aa)
	A0A317X4Z7	Uncharacterized protein. (1454 aa)
	A0A317X5S3	Myb-like domain-containing protein. (587 aa)
	A0A317X725	WD repeat protein. (627 aa)
	A0A317X9H4	Chromatin remodeling complex subunit. (1470 aa)
	A0A317XAI1	Uncharacterized protein. (857 aa)
	A0A317XDD2	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (469 aa)
	A0A317XDZ8	2,3-diketo-5-methylthio-1-phosphopentane phosphatase. (302 aa)

Your Current Organism:

Aspergillus sclerotioniger

NCBI taxonomy Id: 1450535
Other names: A. sclerotioniger CBS 115572, Aspergillus sclerotioniger CBS 115572

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317V0S2	A0A317V5E6	YL1-domain-containing protein.	HIT-type domain-containing protein.	0.950
A0A317V0S2	A0A317V8Z1	YL1-domain-containing protein.	Actin family protein; Belongs to the actin family.	0.933
A0A317V0S2	A0A317VW83	YL1-domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.404
A0A317V0S2	A0A317VWK8	YL1-domain-containing protein.	SNF2 family helicase/ATPase.	0.971
A0A317V0S2	A0A317W9P4	YL1-domain-containing protein.	RXT2_N domain-containing protein.	0.520
A0A317V0S2	A0A317WI14	YL1-domain-containing protein.	SET domain-containing protein.	0.493
A0A317V0S2	A0A317WJU7	YL1-domain-containing protein.	Chromatin modification-related protein.	0.535
A0A317V0S2	A0A317WNE2	YL1-domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.974
A0A317V0S2	A0A317WPT3	YL1-domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.956
A0A317V0S2	A0A317WPX1	YL1-domain-containing protein.	Yeats-domain-containing protein.	0.972
A0A317V0S2	A0A317WQT2	YL1-domain-containing protein.	Chromatin modification-related protein eaf3.	0.885
A0A317V0S2	A0A317WUT3	YL1-domain-containing protein.	PAPA-1 domain-containing protein.	0.885
A0A317V0S2	A0A317X470	YL1-domain-containing protein.	Chromatin modification-related protein.	0.655
A0A317V0S2	A0A317X4Z7	YL1-domain-containing protein.	Uncharacterized protein.	0.529
A0A317V0S2	A0A317X5S3	YL1-domain-containing protein.	Myb-like domain-containing protein.	0.974
A0A317V0S2	A0A317X725	YL1-domain-containing protein.	WD repeat protein.	0.416
A0A317V0S2	A0A317X9H4	YL1-domain-containing protein.	Chromatin remodeling complex subunit.	0.529
A0A317V0S2	A0A317XDD2	YL1-domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.973
A0A317V0S2	A0A317XH72	YL1-domain-containing protein.	PHD domain-containing protein.	0.468
A0A317V5E6	A0A317V0S2	HIT-type domain-containing protein.	YL1-domain-containing protein.	0.950