22 items (Aspergillus sclerotioniger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317V4I3	Uncharacterized protein. (588 aa)
	A0A317V7M5	Uncharacterized protein. (298 aa)
	A0A317V8V0	Uncharacterized protein. (340 aa)
	A0A317VAQ2	Checkpoint protein kinase. (818 aa)
	A0A317VBN5	Structural maintenance of chromosomes protein. (1262 aa)
	A0A317VGH5	Nuclear cohesin complex subunit. (1213 aa)
	A0A317VGT3	Sister chromatid cohesion protein Dcc1. (422 aa)
	A0A317VIT1	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (628 aa)
	A0A317VY97	DNA repair helicase. (853 aa)
	A0A317W0F1	Uncharacterized protein. (400 aa)
	A0A317W1T0	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (639 aa)
	A0A317W2E2	Protein kinase domain-containing protein. (1141 aa)
	A0A317W2T3	Sister chromatid cohesion protein. (1771 aa)
	A0A317W4I2	CLPTM1 domain protein. (634 aa)
	A0A317WA83	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (289 aa)
	A0A317WKX9	Uncharacterized protein. (1498 aa)
	A0A317WNG7	Putative RecQ-mediated genome instability protein. (230 aa)
	A0A317WQ74	Uncharacterized protein. (361 aa)
	A0A317WSW6	Structural maintenance of chromosomes protein. (1199 aa)
	A0A317WVQ3	Rad21_Rec8_N domain-containing protein. (720 aa)
	A0A317X439	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (350 aa)
	BO94DRAFT_9492	Sister chromatid cohesion protein. (663 aa)

Your Current Organism:

Aspergillus sclerotioniger

NCBI taxonomy Id: 1450535
Other names: A. sclerotioniger CBS 115572, Aspergillus sclerotioniger CBS 115572

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A317V4I3	A0A317V7M5	A0A317V4I3	A0A317V7M5	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A317V4I3	A0A317VBN5	A0A317V4I3	A0A317VBN5	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.994
A0A317V4I3	A0A317VGH5	A0A317V4I3	A0A317VGH5	Uncharacterized protein.	Nuclear cohesin complex subunit.	0.999
A0A317V4I3	A0A317VGT3	A0A317V4I3	A0A317VGT3	Uncharacterized protein.	Sister chromatid cohesion protein Dcc1.	0.421
A0A317V4I3	A0A317VY97	A0A317V4I3	A0A317VY97	Uncharacterized protein.	DNA repair helicase.	0.745
A0A317V4I3	A0A317W0F1	A0A317V4I3	A0A317W0F1	Uncharacterized protein.	Uncharacterized protein.	0.941
A0A317V4I3	A0A317W1T0	A0A317V4I3	A0A317W1T0	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	0.701
A0A317V4I3	A0A317W2E2	A0A317V4I3	A0A317W2E2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.989
A0A317V4I3	A0A317W2T3	A0A317V4I3	A0A317W2T3	Uncharacterized protein.	Sister chromatid cohesion protein.	0.994
A0A317V4I3	A0A317W4I2	A0A317V4I3	A0A317W4I2	Uncharacterized protein.	CLPTM1 domain protein.	0.418
A0A317V4I3	A0A317WKX9	A0A317V4I3	A0A317WKX9	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A317V4I3	A0A317WQ74	A0A317V4I3	A0A317WQ74	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A317V4I3	A0A317WSW6	A0A317V4I3	A0A317WSW6	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.998
A0A317V4I3	A0A317WVQ3	A0A317V4I3	A0A317WVQ3	Uncharacterized protein.	Rad21_Rec8_N domain-containing protein.	0.730
A0A317V4I3	BO94DRAFT_9492	A0A317V4I3	A0A317XCT1	Uncharacterized protein.	Sister chromatid cohesion protein.	0.941
A0A317V7M5	A0A317V4I3	A0A317V7M5	A0A317V4I3	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A317V7M5	A0A317VBN5	A0A317V7M5	A0A317VBN5	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.436
A0A317V7M5	A0A317VGH5	A0A317V7M5	A0A317VGH5	Uncharacterized protein.	Nuclear cohesin complex subunit.	0.992
A0A317V7M5	A0A317VGT3	A0A317V7M5	A0A317VGT3	Uncharacterized protein.	Sister chromatid cohesion protein Dcc1.	0.487
A0A317V7M5	A0A317VIT1	A0A317V7M5	A0A317VIT1	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.528