(24 nodes) snoRNA binding network (Aspergillus sclerotioniger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317XEK9	Putative rRNA processing protein Bystin. (496 aa)
	A0A317XF04	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (206 aa)
	A0A317VH53	Nucleic acid-binding protein. (1817 aa)
	A0A317VHM0	Nop14-like protein. (911 aa)
	A0A317VK84	WD domain protein. (962 aa)
	A0A317W1X5	WD40 repeat-like protein. (931 aa)
	A0A317W8B1	Nucleolar protein Nop5. (583 aa)
	A0A317W9K3	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (671 aa)
	A0A317V4J2	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
	A0A317WED9	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (475 aa)
	A0A317WJ44	Ribosome biogenesis protein Nop10. (67 aa)
	A0A317WNH7	Pre-rRNA processing nucleolar protein Sik1. (526 aa)
	A0A317WT11	Putative ribosome biogenesis protein. (1175 aa)
	A0A317WTB8	DUF663-domain-containing protein. (801 aa)
	A0A317WUH5	Uncharacterized protein. (393 aa)
	A0A317V0K3	Uncharacterized protein. (912 aa)
	A0A317X6L5	U3 small nucleolar ribonucleo protein subunit. (188 aa)
	A0A317X7P6	WD40 repeat-like protein. (623 aa)
	A0A317X822	Putative small nuclear ribonucleo protein complex protein Nhp2. (234 aa)
	A0A317X9H7	Brix-domain-containing protein. (297 aa)
	A0A317X9S8	Small nucleolar ribonucleo protein complex subunit. (976 aa)
	A0A317XAT2	RNA helicase. (807 aa)
	A0A317XC17	SSU processome component Utp10. (1799 aa)
	A0A317XDD0	Small nucleolar ribonucleo protein complex subunit Utp15. (543 aa)

Your Current Organism:

Aspergillus sclerotioniger

NCBI taxonomy Id: 1450535
Other names: A. sclerotioniger CBS 115572, Aspergillus sclerotioniger CBS 115572

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317V0K3	A0A317V4J2	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.580
A0A317V0K3	A0A317VH53	Uncharacterized protein.	Nucleic acid-binding protein.	0.588
A0A317V0K3	A0A317VHM0	Uncharacterized protein.	Nop14-like protein.	0.604
A0A317V0K3	A0A317VK84	Uncharacterized protein.	WD domain protein.	0.580
A0A317V0K3	A0A317W1X5	Uncharacterized protein.	WD40 repeat-like protein.	0.604
A0A317V0K3	A0A317W8B1	Uncharacterized protein.	Nucleolar protein Nop5.	0.589
A0A317V0K3	A0A317WNH7	Uncharacterized protein.	Pre-rRNA processing nucleolar protein Sik1.	0.580
A0A317V0K3	A0A317WT11	Uncharacterized protein.	Putative ribosome biogenesis protein.	0.603
A0A317V0K3	A0A317WUH5	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A317V0K3	A0A317X6L5	Uncharacterized protein.	U3 small nucleolar ribonucleo protein subunit.	0.580
A0A317V0K3	A0A317X7P6	Uncharacterized protein.	WD40 repeat-like protein.	0.588
A0A317V0K3	A0A317X822	Uncharacterized protein.	Putative small nuclear ribonucleo protein complex protein Nhp2.	0.430
A0A317V0K3	A0A317X9H7	Uncharacterized protein.	Brix-domain-containing protein.	0.601
A0A317V0K3	A0A317X9S8	Uncharacterized protein.	Small nucleolar ribonucleo protein complex subunit.	0.590
A0A317V0K3	A0A317XC17	Uncharacterized protein.	SSU processome component Utp10.	0.588
A0A317V0K3	A0A317XDD0	Uncharacterized protein.	Small nucleolar ribonucleo protein complex subunit Utp15.	0.580
A0A317V0K3	A0A317XEK9	Uncharacterized protein.	Putative rRNA processing protein Bystin.	0.607
A0A317V4J2	A0A317V0K3	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Uncharacterized protein.	0.580
A0A317V4J2	A0A317VH53	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Nucleic acid-binding protein.	0.949
A0A317V4J2	A0A317VHM0	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Nop14-like protein.	0.947