(38 nodes) Ribosome assembly network (Aspergillus sclerotioniger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A0A317UUZ6	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (102 aa)
	A0A317UYW5	Nop53-domain-containing protein. (733 aa)
	A0A317V2E8	Putative WD-repeat protein. (1058 aa)
	A0A317VH53	Nucleic acid-binding protein. (1817 aa)
	A0A317VH62	Uncharacterized protein. (376 aa)
	A0A317VJQ4	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	A0A317VSD4	Brix-domain-containing protein. (460 aa)
	A0A317VUU6	Putative ribosomal small subunit assembly protein. (303 aa)
	A0A317VV42	Ribosomal protein S28e. (68 aa)
	A0A317W0E4	40S ribosomal protein S27. (81 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (299 aa)
	A0A317W8A1	RNA helicase. (637 aa)
	A0A317W9D3	Translational machinery component. (234 aa)
	A0A317WCY3	60S ribosomal protein L6. (202 aa)
	A0A317WGR3	Ribosomal_L23eN domain-containing protein. (154 aa)
	A0A317WH11	P-loop containing nucleoside triphosphate hydrolase protein. (671 aa)
	A0A317WII4	Angio-associated migratory cell protein. (515 aa)
	A0A317WJ40	WD40 repeat-like protein. (901 aa)
	A0A317WK96	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
	A0A317WKL5	PUA-like protein. (129 aa)
	A0A317WPN0	Regulatory protein SUAPRGA1. (310 aa)
	A0A317WSD5	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4879 aa)
	A0A317WSK8	Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	A0A317WV46	DEAD-domain-containing protein. (844 aa)
	A0A317WZ52	Uncharacterized protein. (114 aa)
	A0A317X372	Uncharacterized protein. (254 aa)
	A0A317X3M6	60S ribosomal protein L10. (223 aa)
	A0A317X4R9	Putative eukaryotic translation initiation factor 5. (424 aa)
	A0A317X6F9	Putative ribosome biogenesis protein Ria1. (1077 aa)
	A0A317X8D6	60S ribosomal protein L5. (299 aa)
	A0A317X981	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
	A0A317XA35	40S ribosomal protein S19. (148 aa)
	A0A317XAI8	Shwachman-Bodian-diamond syndrome protein. (360 aa)
	A0A317XAV9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	A0A317XB82	Brix-domain-containing protein. (654 aa)
	A0A317XDC6	Multiple RNA-binding domain-containing protein 1. (826 aa)
	A0A317XFF5	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (359 aa)

Your Current Organism:

Aspergillus sclerotioniger

NCBI taxonomy Id: 1450535
Other names: A. sclerotioniger CBS 115572, Aspergillus sclerotioniger CBS 115572

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A317UUZ6	A0A317VH53	A0A317UUZ6	A0A317VH53	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	Nucleic acid-binding protein.	0.623
A0A317UUZ6	A0A317W9D3	A0A317UUZ6	A0A317W9D3	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	Translational machinery component.	0.978
A0A317UUZ6	A0A317WGR3	A0A317UUZ6	A0A317WGR3	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L23eN domain-containing protein.	0.580
A0A317UUZ6	A0A317WK96	A0A317UUZ6	A0A317WK96	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.928
A0A317UUZ6	A0A317WSK8	A0A317UUZ6	A0A317WSK8	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.	0.969
A0A317UUZ6	A0A317X3M6	A0A317UUZ6	A0A317X3M6	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	60S ribosomal protein L10.	0.749
A0A317UUZ6	A0A317X981	A0A317UUZ6	A0A317X981	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.707
A0A317UUZ6	A0A317XAV9	A0A317UUZ6	A0A317XAV9	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.707
A0A317UUZ6	A0A317XFF5	A0A317UUZ6	A0A317XFF5	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.975
A0A317UUZ6	RPS0	A0A317UUZ6	A0A317W153	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.916
A0A317UYW5	A0A317VH53	A0A317UYW5	A0A317VH53	Nop53-domain-containing protein.	Nucleic acid-binding protein.	0.487
A0A317UYW5	A0A317VSD4	A0A317UYW5	A0A317VSD4	Nop53-domain-containing protein.	Brix-domain-containing protein.	0.790
A0A317UYW5	A0A317VUU6	A0A317UYW5	A0A317VUU6	Nop53-domain-containing protein.	Putative ribosomal small subunit assembly protein.	0.454
A0A317UYW5	A0A317W8A1	A0A317UYW5	A0A317W8A1	Nop53-domain-containing protein.	RNA helicase.	0.855
A0A317UYW5	A0A317WCY3	A0A317UYW5	A0A317WCY3	Nop53-domain-containing protein.	60S ribosomal protein L6.	0.571
A0A317UYW5	A0A317WGR3	A0A317UYW5	A0A317WGR3	Nop53-domain-containing protein.	Ribosomal_L23eN domain-containing protein.	0.529
A0A317UYW5	A0A317WII4	A0A317UYW5	A0A317WII4	Nop53-domain-containing protein.	Angio-associated migratory cell protein.	0.459
A0A317UYW5	A0A317WKL5	A0A317UYW5	A0A317WKL5	Nop53-domain-containing protein.	PUA-like protein.	0.777
A0A317UYW5	A0A317WV46	A0A317UYW5	A0A317WV46	Nop53-domain-containing protein.	DEAD-domain-containing protein.	0.656
A0A317UYW5	A0A317X981	A0A317UYW5	A0A317X981	Nop53-domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.662