11 items (Aspergillus sclerotioniger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317UVQ5	Uncharacterized protein. (144 aa)
	A0A317VG96	CAP-Gly domain-containing protein. (676 aa)
	A0A317VL54	Putative mitotic spindle biogenesis protein Spc19. (167 aa)
	A0A317VVI7	Cap-Gly domain-containing protein. (273 aa)
	A0A317WDJ8	Uncharacterized protein. (247 aa)
	A0A317WW17	Dynactin. (1359 aa)
	A0A317X734	DASH complex component Dam1. (201 aa)
	A0A317X8C6	ARM repeat-containing protein. (899 aa)
	A0A317XB37	Spindle pole body component. (952 aa)
	A0A317XBV3	Uncharacterized protein. (146 aa)
	A0A317XDZ1	Zn(2)-C6 fungal-type domain-containing protein. (763 aa)

Your Current Organism:

Aspergillus sclerotioniger

NCBI taxonomy Id: 1450535
Other names: A. sclerotioniger CBS 115572, Aspergillus sclerotioniger CBS 115572

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317UVQ5	A0A317VL54	Uncharacterized protein.	Putative mitotic spindle biogenesis protein Spc19.	0.967
A0A317UVQ5	A0A317X734	Uncharacterized protein.	DASH complex component Dam1.	0.964
A0A317UVQ5	A0A317XB37	Uncharacterized protein.	Spindle pole body component.	0.965
A0A317UVQ5	A0A317XBV3	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A317UVQ5	A0A317XDZ1	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.749
A0A317VG96	A0A317WDJ8	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.951
A0A317VG96	A0A317WW17	CAP-Gly domain-containing protein.	Dynactin.	0.835
A0A317VG96	A0A317X8C6	CAP-Gly domain-containing protein.	ARM repeat-containing protein.	0.873
A0A317VL54	A0A317UVQ5	Putative mitotic spindle biogenesis protein Spc19.	Uncharacterized protein.	0.967
A0A317VL54	A0A317X734	Putative mitotic spindle biogenesis protein Spc19.	DASH complex component Dam1.	0.967
A0A317VL54	A0A317XB37	Putative mitotic spindle biogenesis protein Spc19.	Spindle pole body component.	0.869
A0A317VL54	A0A317XBV3	Putative mitotic spindle biogenesis protein Spc19.	Uncharacterized protein.	0.957
A0A317VL54	A0A317XDZ1	Putative mitotic spindle biogenesis protein Spc19.	Zn(2)-C6 fungal-type domain-containing protein.	0.839
A0A317WDJ8	A0A317VG96	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.951
A0A317WDJ8	A0A317WW17	Uncharacterized protein.	Dynactin.	0.828
A0A317WDJ8	A0A317X734	Uncharacterized protein.	DASH complex component Dam1.	0.538
A0A317WDJ8	A0A317X8C6	Uncharacterized protein.	ARM repeat-containing protein.	0.951
A0A317WW17	A0A317VG96	Dynactin.	CAP-Gly domain-containing protein.	0.835
A0A317WW17	A0A317WDJ8	Dynactin.	Uncharacterized protein.	0.828
A0A317X734	A0A317UVQ5	DASH complex component Dam1.	Uncharacterized protein.	0.964