8 items (Aspergillus sclerotioniger) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317VLF0	SP-RING-type domain-containing protein. (1216 aa)
	A0A317W9F3	BHLH domain-containing protein. (495 aa)
	A0A317X544	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (178 aa)
	A0A317WK03	BRCT domain-containing protein. (1387 aa)
	A0A317WH31	Putative forkhead transcription factor. (723 aa)
	A0A317VBU9	MIZ zinc finger protein. (532 aa)
	A0A317WD12	Ubiquitin-like modifier. (92 aa)
	A0A317W0S4	Forkhead transcription factor Fkh1/2. (683 aa)

Your Current Organism:

Aspergillus sclerotioniger

NCBI taxonomy Id: 1450535
Other names: A. sclerotioniger CBS 115572, Aspergillus sclerotioniger CBS 115572

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317VBU9	A0A317W0S4	MIZ zinc finger protein.	Forkhead transcription factor Fkh1/2.	0.531
A0A317VBU9	A0A317W9F3	MIZ zinc finger protein.	BHLH domain-containing protein.	0.466
A0A317VBU9	A0A317WD12	MIZ zinc finger protein.	Ubiquitin-like modifier.	0.977
A0A317VBU9	A0A317WK03	MIZ zinc finger protein.	BRCT domain-containing protein.	0.771
A0A317VBU9	A0A317X544	MIZ zinc finger protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.977
A0A317VLF0	A0A317W0S4	SP-RING-type domain-containing protein.	Forkhead transcription factor Fkh1/2.	0.531
A0A317VLF0	A0A317W9F3	SP-RING-type domain-containing protein.	BHLH domain-containing protein.	0.466
A0A317VLF0	A0A317WD12	SP-RING-type domain-containing protein.	Ubiquitin-like modifier.	0.973
A0A317VLF0	A0A317WK03	SP-RING-type domain-containing protein.	BRCT domain-containing protein.	0.771
A0A317VLF0	A0A317X544	SP-RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.972
A0A317W0S4	A0A317VBU9	Forkhead transcription factor Fkh1/2.	MIZ zinc finger protein.	0.531
A0A317W0S4	A0A317VLF0	Forkhead transcription factor Fkh1/2.	SP-RING-type domain-containing protein.	0.531
A0A317W0S4	A0A317WD12	Forkhead transcription factor Fkh1/2.	Ubiquitin-like modifier.	0.463
A0A317W0S4	A0A317WH31	Forkhead transcription factor Fkh1/2.	Putative forkhead transcription factor.	0.895
A0A317W0S4	A0A317X544	Forkhead transcription factor Fkh1/2.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.742
A0A317W9F3	A0A317VBU9	BHLH domain-containing protein.	MIZ zinc finger protein.	0.466
A0A317W9F3	A0A317VLF0	BHLH domain-containing protein.	SP-RING-type domain-containing protein.	0.466
A0A317W9F3	A0A317WD12	BHLH domain-containing protein.	Ubiquitin-like modifier.	0.535
A0A317W9F3	A0A317X544	BHLH domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.573
A0A317WD12	A0A317VBU9	Ubiquitin-like modifier.	MIZ zinc finger protein.	0.977