STRINGSTRING
A0A395I301 A0A395I301 A0A395I3J8 A0A395I3J8 A0A395I3T5 A0A395I3T5 A0A395I5U2 A0A395I5U2 A0A395I7F3 A0A395I7F3 A0A395I8P8 A0A395I8P8 A0A395IAX9 A0A395IAX9 A0A395IBJ6 A0A395IBJ6 A0A395IDX4 A0A395IDX4 A0A395HNF3 A0A395HNF3 A0A395HKH7 A0A395HKH7 A0A395HI92 A0A395HI92 A0A395HP52 A0A395HP52 A0A395HYY2 A0A395HYY2 A0A395HZJ6 A0A395HZJ6 A0A395I2T1 A0A395I2T1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A395I301Small nuclear ribonucleoprotein G. (78 aa)
A0A395I3J8Uncharacterized protein. (1577 aa)
A0A395I3T5Small nuclear ribonucleoprotein Sm D2. (115 aa)
A0A395I5U2RNA-binding domain-containing protein. (389 aa)
A0A395I7F3Uncharacterized protein. (585 aa)
A0A395I8P8Uncharacterized protein. (77 aa)
A0A395IAX9Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
A0A395IBJ6Uncharacterized protein. (581 aa)
A0A395IDX4LUC7-domain-containing protein. (283 aa)
A0A395HNF3Sm-like ribonucleo protein. (218 aa)
A0A395HKH7U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (209 aa)
A0A395HI92Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
A0A395HP52Uncharacterized protein. (268 aa)
A0A395HYY2Uncharacterized protein. (846 aa)
A0A395HZJ6Uncharacterized protein. (762 aa)
A0A395I2T1U1 small nuclear ribonucleo protein usp102. (255 aa)
Your Current Organism:
Aspergillus homomorphus
NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889
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