(6 nodes) Rpd3L complex network (Aspergillus homomorphus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395IE97	Chromatin modification-related protein. (755 aa)
	A0A395HLP8	Uncharacterized protein. (221 aa)
	A0A395HNW0	RXT2_N domain-containing protein. (540 aa)
	A0A395HTH7	Histone deacetylase 1. (692 aa)
	A0A395HXM8	PHD domain-containing protein. (607 aa)
	A0A395ICJ8	Rxt3-domain-containing protein. (912 aa)

Your Current Organism:

Aspergillus homomorphus

NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395HNW0	A0A395HTH7	RXT2_N domain-containing protein.	Histone deacetylase 1.	0.884
A0A395HNW0	A0A395HXM8	RXT2_N domain-containing protein.	PHD domain-containing protein.	0.876
A0A395HNW0	A0A395ICJ8	RXT2_N domain-containing protein.	Rxt3-domain-containing protein.	0.776
A0A395HTH7	A0A395HNW0	Histone deacetylase 1.	RXT2_N domain-containing protein.	0.884
A0A395HTH7	A0A395HXM8	Histone deacetylase 1.	PHD domain-containing protein.	0.899
A0A395HTH7	A0A395ICJ8	Histone deacetylase 1.	Rxt3-domain-containing protein.	0.817
A0A395HTH7	A0A395IE97	Histone deacetylase 1.	Chromatin modification-related protein.	0.618
A0A395HXM8	A0A395HNW0	PHD domain-containing protein.	RXT2_N domain-containing protein.	0.876
A0A395HXM8	A0A395HTH7	PHD domain-containing protein.	Histone deacetylase 1.	0.899
A0A395HXM8	A0A395ICJ8	PHD domain-containing protein.	Rxt3-domain-containing protein.	0.807
A0A395ICJ8	A0A395HNW0	Rxt3-domain-containing protein.	RXT2_N domain-containing protein.	0.776
A0A395ICJ8	A0A395HTH7	Rxt3-domain-containing protein.	Histone deacetylase 1.	0.817
A0A395ICJ8	A0A395HXM8	Rxt3-domain-containing protein.	PHD domain-containing protein.	0.807
A0A395IE97	A0A395HTH7	Chromatin modification-related protein.	Histone deacetylase 1.	0.618