STRINGSTRING
LSM1 LSM1 LSM4 LSM4 A0A395HYI6 A0A395HYI6 A0A395HGK8 A0A395HGK8 A0A395HHY7 A0A395HHY7 A0A395HI92 A0A395HI92 A0A395HIP3 A0A395HIP3 A0A395HIY4 A0A395HIY4 A0A395HJ70 A0A395HJ70 A0A395HK65 A0A395HK65 A0A395HKH7 A0A395HKH7 A0A395HLG9 A0A395HLG9 A0A395HLH8 A0A395HLH8 A0A395HLZ1 A0A395HLZ1 A0A395HMC1 A0A395HMC1 A0A395HML2 A0A395HML2 A0A395HMN1 A0A395HMN1 A0A395HMS5 A0A395HMS5 A0A395HN32 A0A395HN32 A0A395HNF3 A0A395HNF3 A0A395HP48 A0A395HP48 A0A395HP52 A0A395HP52 A0A395HQ57 A0A395HQ57 A0A395HQJ4 A0A395HQJ4 A0A395HR91 A0A395HR91 A0A395HRE9 A0A395HRE9 A0A395HSG6 A0A395HSG6 LSM8 LSM8 A0A395HUA1 A0A395HUA1 A0A395HUQ5 A0A395HUQ5 A0A395HW37 A0A395HW37 A0A395HWA3 A0A395HWA3 A0A395HYQ1 A0A395HYQ1 A0A395HYU4 A0A395HYU4 A0A395HYY2 A0A395HYY2 A0A395HZ05 A0A395HZ05 A0A395HZJ6 A0A395HZJ6 A0A395I0S5 A0A395I0S5 A0A395I2C6 A0A395I2C6 A0A395I2H6 A0A395I2H6 A0A395I2T1 A0A395I2T1 A0A395I301 A0A395I301 A0A395I3J8 A0A395I3J8 A0A395I3T5 A0A395I3T5 LSM3 LSM3 A0A395I5U2 A0A395I5U2 A0A395I685 A0A395I685 A0A395I6A4 A0A395I6A4 LSM5 LSM5 A0A395I7F3 A0A395I7F3 A0A395I8P8 A0A395I8P8 A0A395I906 A0A395I906 A0A395I9K5 A0A395I9K5 A0A395IAX9 A0A395IAX9 A0A395IB87 A0A395IB87 A0A395IBJ6 A0A395IBJ6 A0A395IBQ0 A0A395IBQ0 A0A395ICT7 A0A395ICT7 A0A395IDX4 A0A395IDX4 A0A395IET3 A0A395IET3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (175 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
A0A395HYI6Matrin-type domain-containing protein. (238 aa)
A0A395HGK8Splicing factor 3b, subunit 2. (564 aa)
A0A395HHY7RRM domain-containing protein. (216 aa)
A0A395HI92Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
A0A395HIP3CPSF_A domain-containing protein. (1209 aa)
A0A395HIY4Putative pre-mRNA branch site protein p14. (113 aa)
A0A395HJ70U5 small nuclear ribonucleo protein component. (986 aa)
A0A395HK65Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
A0A395HKH7U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (209 aa)
A0A395HLG9Like-Sm ribonucleo protein. (80 aa)
A0A395HLH8Splicing factor 3b subunit 4. (353 aa)
A0A395HLZ1Uncharacterized protein. (372 aa)
A0A395HMC1G10 protein. (148 aa)
A0A395HML2PROCN-domain-containing protein. (2352 aa)
A0A395HMN1RNA binding domain protein. (195 aa)
A0A395HMS5TPR_REGION domain-containing protein. (940 aa)
A0A395HN32WD40 repeat-like protein. (522 aa)
A0A395HNF3Sm-like ribonucleo protein. (218 aa)
A0A395HP48Pre-mRNA splicing helicase. (2928 aa)
A0A395HP52Uncharacterized protein. (268 aa)
A0A395HQ57Putative DNA binding protein SART-1. (672 aa)
A0A395HQJ4Multiple RNA-binding domain-containing protein 1. (831 aa)
A0A395HR91Pre-mRNA splicing factor. (1305 aa)
A0A395HRE9Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
A0A395HSG6Putative nuclear mRNA splicing factor-associated protein. (394 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A395HUA1Nop domain-containing protein. (530 aa)
A0A395HUQ5Uncharacterized protein. (560 aa)
A0A395HW37Uncharacterized protein. (481 aa)
A0A395HWA3GYF domain-containing protein. (448 aa)
A0A395HYQ1C2H2-type domain-containing protein. (218 aa)
A0A395HYU4U2-associated snRNP A. (252 aa)
A0A395HYY2Uncharacterized protein. (846 aa)
A0A395HZ05Putative topoisomerase II associated protein. (860 aa)
A0A395HZJ6Uncharacterized protein. (762 aa)
A0A395I0S5U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A395I2C6U2 snRNP component prp10. (1235 aa)
A0A395I2H6WD repeat protein. (351 aa)
A0A395I2T1U1 small nuclear ribonucleo protein usp102. (255 aa)
A0A395I301Small nuclear ribonucleoprotein G. (78 aa)
A0A395I3J8Uncharacterized protein. (1577 aa)
A0A395I3T5Small nuclear ribonucleoprotein Sm D2. (115 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A395I5U2RNA-binding domain-containing protein. (389 aa)
A0A395I685CID domain-containing protein. (545 aa)
A0A395I6A4Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A395I7F3Uncharacterized protein. (585 aa)
A0A395I8P8Uncharacterized protein. (77 aa)
A0A395I906U6 snRNA-associated Sm-like protein LSm7. (139 aa)
A0A395I9K5PHF5-like protein. (108 aa)
A0A395IAX9Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
A0A395IB87U4/U6 small nuclear ribonucleo protein. (593 aa)
A0A395IBJ6Uncharacterized protein. (581 aa)
A0A395IBQ0SMN domain-containing protein. (178 aa)
A0A395ICT7SFM domain-containing protein. (375 aa)
A0A395IDX4LUC7-domain-containing protein. (283 aa)
A0A395IET3Uncharacterized protein. (211 aa)
Your Current Organism:
Aspergillus homomorphus
NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889
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