33 items (Aspergillus homomorphus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395HZ07	Uncharacterized protein. (633 aa)
	A0A395HG23	RNA-binding domain-containing protein. (209 aa)
	A0A395HI92	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
	A0A395HK00	ABM domain-containing protein. (104 aa)
	A0A395HK62	Uncharacterized protein. (300 aa)
	A0A395HM22	G-patch domain-containing protein. (571 aa)
	A0A395HP52	Uncharacterized protein. (268 aa)
	A0A395HQ28	Zn(2)-C6 fungal-type domain-containing protein. (652 aa)
	A0A395HR55	RNP domain protein. (188 aa)
	A0A395HS29	mRNA cleavage factor complex component Pcf11. (653 aa)
	A0A395HSZ0	mRNA splicing protein. (475 aa)
	A0A395HT86	Uncharacterized protein. (606 aa)
	A0A395HUG4	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (278 aa)
	A0A395HWY6	Putative mRNA splicing factor. (591 aa)
	A0A395HXL4	Uncharacterized protein. (288 aa)
	A0A395HYW1	GH16 domain-containing protein. (461 aa)
	A0A395HZL5	PWI domain-containing protein. (456 aa)
	A0A395I092	RNA-binding domain-containing protein. (311 aa)
	A0A395I0X0	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (587 aa)
	A0A395I1S7	Uncharacterized protein. (660 aa)
	A0A395I301	Small nuclear ribonucleoprotein G. (78 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (567 aa)
	A0A395I686	SAP domain-containing protein. (304 aa)
	A0A395I6K2	mRNA 3'-end-processing protein rna14. (1010 aa)
	A0A395I6L0	GH16 domain-containing protein. (399 aa)
	A0A395I7N6	Uncharacterized protein. (335 aa)
	A0A395I830	Uncharacterized protein. (389 aa)
	A0A395I8H0	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	A0A395I8P8	Uncharacterized protein. (77 aa)
	A0A395I925	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (603 aa)
	A0A395IAI6	Uncharacterized protein. (477 aa)
	A0A395IAI9	WD40 repeat-like protein. (372 aa)
	A0A395IAS6	RRM domain-containing protein. (313 aa)

Your Current Organism:

Aspergillus homomorphus

NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A395HG23	A0A395HI92	A0A395HG23	A0A395HI92	RNA-binding domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.519
A0A395HG23	A0A395HK00	A0A395HG23	A0A395HK00	RNA-binding domain-containing protein.	ABM domain-containing protein.	0.697
A0A395HG23	A0A395HK62	A0A395HG23	A0A395HK62	RNA-binding domain-containing protein.	Uncharacterized protein.	0.907
A0A395HG23	A0A395HP52	A0A395HG23	A0A395HP52	RNA-binding domain-containing protein.	Uncharacterized protein.	0.522
A0A395HG23	A0A395HR55	A0A395HG23	A0A395HR55	RNA-binding domain-containing protein.	RNP domain protein.	0.807
A0A395HG23	A0A395HS29	A0A395HG23	A0A395HS29	RNA-binding domain-containing protein.	mRNA cleavage factor complex component Pcf11.	0.693
A0A395HG23	A0A395HSZ0	A0A395HG23	A0A395HSZ0	RNA-binding domain-containing protein.	mRNA splicing protein.	0.706
A0A395HG23	A0A395HT86	A0A395HG23	A0A395HT86	RNA-binding domain-containing protein.	Uncharacterized protein.	0.855
A0A395HG23	A0A395HUG4	A0A395HG23	A0A395HUG4	RNA-binding domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.736
A0A395HG23	A0A395HWY6	A0A395HG23	A0A395HWY6	RNA-binding domain-containing protein.	Putative mRNA splicing factor.	0.757
A0A395HG23	A0A395HYW1	A0A395HG23	A0A395HYW1	RNA-binding domain-containing protein.	GH16 domain-containing protein.	0.955
A0A395HG23	A0A395HZ07	A0A395HG23	A0A395HZ07	RNA-binding domain-containing protein.	Uncharacterized protein.	0.716
A0A395HG23	A0A395HZL5	A0A395HG23	A0A395HZL5	RNA-binding domain-containing protein.	PWI domain-containing protein.	0.724
A0A395HG23	A0A395I092	A0A395HG23	A0A395I092	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.832
A0A395HG23	A0A395I0X0	A0A395HG23	A0A395I0X0	RNA-binding domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.998
A0A395HG23	A0A395I1S7	A0A395HG23	A0A395I1S7	RNA-binding domain-containing protein.	Uncharacterized protein.	0.676
A0A395HG23	A0A395I301	A0A395HG23	A0A395I301	RNA-binding domain-containing protein.	Small nuclear ribonucleoprotein G.	0.579
A0A395HG23	A0A395I686	A0A395HG23	A0A395I686	RNA-binding domain-containing protein.	SAP domain-containing protein.	0.697
A0A395HG23	A0A395I6L0	A0A395HG23	A0A395I6L0	RNA-binding domain-containing protein.	GH16 domain-containing protein.	0.955
A0A395HG23	A0A395I830	A0A395HG23	A0A395I830	RNA-binding domain-containing protein.	Uncharacterized protein.	0.787