37 items (Aspergillus homomorphus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A395I3B4	DUF500-domain-containing protein. (463 aa)
	A0A395I439	TRAPP complex protein TRS85. (739 aa)
	A0A395I4J2	Sec2p domain-containing protein. (256 aa)
	A0A395I4J5	Putative trafficking protein particle complex subunit 2/Sedlin. (191 aa)
	A0A395I4S8	Ras-related protein rab-6A. (209 aa)
	A0A395I4W9	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (264 aa)
	A0A395I588	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (187 aa)
	A0A395I5Z6	Uncharacterized protein. (442 aa)
	A0A395I7Y0	DUF500-domain-containing protein. (411 aa)
	A0A395I833	Vacuolar fusion protein mon1. (627 aa)
	A0A395I870	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (468 aa)
	A0A395I8C3	DDENN domain protein. (1123 aa)
	A0A395I9C9	Sedlin. (166 aa)
	A0A395I9P3	DUF974 domain protein. (336 aa)
	A0A395IBM5	Uncharacterized protein. (766 aa)
	A0A395ICY9	UDENN domain-containing protein. (914 aa)
	A0A395ID97	Intracellular protein transport protein. (826 aa)
	A0A395HIG2	Putative ras family GTPase. (315 aa)
	A0A395HIL6	Hypercellular protein HypA. (1476 aa)
	A0A395HN93	Uncharacterized protein. (1262 aa)
	A0A395HZR7	DUF500-domain-containing protein. (427 aa)
	A0A395HWZ3	Dicer-like protein 2-1; Belongs to the helicase family. Dicer subfamily. (1388 aa)
	A0A395HVX1	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (517 aa)
	A0A395HVW0	RIC1-domain-containing protein. (1038 aa)
	A0A395HUU2	VPS9 domain protein. (738 aa)
	A0A395HTF3	ATP-grasp_3 domain-containing protein. (395 aa)
	A0A395HT52	TMEM1 family protein. (1447 aa)
	A0A395HRX6	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (168 aa)
	A0A395HRX2	Sec2p-domain-containing protein. (693 aa)
	A0A395HNG1	Uncharacterized protein. (828 aa)
	A0A395HQY5	Trafficking protein particle complex subunit BET3. (192 aa)
	A0A395I2U1	Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. (1494 aa)
	A0A395I1P6	NCA2-domain-containing protein. (652 aa)
	A0A395I1E8	Uncharacterized protein. (234 aa)
	A0A395I0L7	Secretion related GTPase srgA. (206 aa)
	A0A395HI55	Uncharacterized protein. (134 aa)
	A0A395HHM5	Ras-domain-containing protein. (202 aa)

Your Current Organism:

Aspergillus homomorphus

NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395HHM5	A0A395HI55	Ras-domain-containing protein.	Uncharacterized protein.	0.977
A0A395HHM5	A0A395HIG2	Ras-domain-containing protein.	Putative ras family GTPase.	0.657
A0A395HHM5	A0A395HIL6	Ras-domain-containing protein.	Hypercellular protein HypA.	0.873
A0A395HHM5	A0A395HN93	Ras-domain-containing protein.	Uncharacterized protein.	0.771
A0A395HHM5	A0A395HQY5	Ras-domain-containing protein.	Trafficking protein particle complex subunit BET3.	0.991
A0A395HHM5	A0A395HRX6	Ras-domain-containing protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.989
A0A395HHM5	A0A395HT52	Ras-domain-containing protein.	TMEM1 family protein.	0.857
A0A395HHM5	A0A395HTF3	Ras-domain-containing protein.	ATP-grasp_3 domain-containing protein.	0.796
A0A395HHM5	A0A395HUU2	Ras-domain-containing protein.	VPS9 domain protein.	0.568
A0A395HHM5	A0A395HVW0	Ras-domain-containing protein.	RIC1-domain-containing protein.	0.867
A0A395HHM5	A0A395HVX1	Ras-domain-containing protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.967
A0A395HHM5	A0A395I0L7	Ras-domain-containing protein.	Secretion related GTPase srgA.	0.954
A0A395HHM5	A0A395I1E8	Ras-domain-containing protein.	Uncharacterized protein.	0.948
A0A395HHM5	A0A395I1P6	Ras-domain-containing protein.	NCA2-domain-containing protein.	0.972
A0A395HHM5	A0A395I439	Ras-domain-containing protein.	TRAPP complex protein TRS85.	0.988
A0A395HHM5	A0A395I4J5	Ras-domain-containing protein.	Putative trafficking protein particle complex subunit 2/Sedlin.	0.983
A0A395HHM5	A0A395I4S8	Ras-domain-containing protein.	Ras-related protein rab-6A.	0.898
A0A395HHM5	A0A395I4W9	Ras-domain-containing protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.985
A0A395HHM5	A0A395I588	Ras-domain-containing protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.987
A0A395HHM5	A0A395I5Z6	Ras-domain-containing protein.	Uncharacterized protein.	0.796