(5 nodes) Cdc73/Paf1 complex network (Aspergillus saccharolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A318Z2Q6	Putative RNA polymerase II transcription elongation factor. (1222 aa)
	A0A318ZCT5	CDC73-domain-containing protein. (505 aa)
	A0A318ZK35	Uncharacterized protein. (457 aa)
	A0A318ZN96	RNA polymerase II transcription elongation factor Rtf1p. (611 aa)
	A0A319AE73	Paf1-domain-containing protein. (505 aa)

Your Current Organism:

Aspergillus saccharolyticus

NCBI taxonomy Id: 1450539
Other names: A. saccharolyticus JOP 1030-1, Aspergillus saccharolyticus JOP 1030-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A318Z2Q6	A0A318ZCT5	Putative RNA polymerase II transcription elongation factor.	CDC73-domain-containing protein.	0.998
A0A318Z2Q6	A0A318ZK35	Putative RNA polymerase II transcription elongation factor.	Uncharacterized protein.	0.998
A0A318Z2Q6	A0A318ZN96	Putative RNA polymerase II transcription elongation factor.	RNA polymerase II transcription elongation factor Rtf1p.	0.995
A0A318Z2Q6	A0A319AE73	Putative RNA polymerase II transcription elongation factor.	Paf1-domain-containing protein.	0.998
A0A318ZCT5	A0A318Z2Q6	CDC73-domain-containing protein.	Putative RNA polymerase II transcription elongation factor.	0.998
A0A318ZCT5	A0A318ZK35	CDC73-domain-containing protein.	Uncharacterized protein.	0.998
A0A318ZCT5	A0A318ZN96	CDC73-domain-containing protein.	RNA polymerase II transcription elongation factor Rtf1p.	0.994
A0A318ZCT5	A0A319AE73	CDC73-domain-containing protein.	Paf1-domain-containing protein.	0.998
A0A318ZK35	A0A318Z2Q6	Uncharacterized protein.	Putative RNA polymerase II transcription elongation factor.	0.998
A0A318ZK35	A0A318ZCT5	Uncharacterized protein.	CDC73-domain-containing protein.	0.998
A0A318ZK35	A0A318ZN96	Uncharacterized protein.	RNA polymerase II transcription elongation factor Rtf1p.	0.994
A0A318ZK35	A0A319AE73	Uncharacterized protein.	Paf1-domain-containing protein.	0.992
A0A318ZN96	A0A318Z2Q6	RNA polymerase II transcription elongation factor Rtf1p.	Putative RNA polymerase II transcription elongation factor.	0.995
A0A318ZN96	A0A318ZCT5	RNA polymerase II transcription elongation factor Rtf1p.	CDC73-domain-containing protein.	0.994
A0A318ZN96	A0A318ZK35	RNA polymerase II transcription elongation factor Rtf1p.	Uncharacterized protein.	0.994
A0A318ZN96	A0A319AE73	RNA polymerase II transcription elongation factor Rtf1p.	Paf1-domain-containing protein.	0.995
A0A319AE73	A0A318Z2Q6	Paf1-domain-containing protein.	Putative RNA polymerase II transcription elongation factor.	0.998
A0A319AE73	A0A318ZCT5	Paf1-domain-containing protein.	CDC73-domain-containing protein.	0.998
A0A319AE73	A0A318ZK35	Paf1-domain-containing protein.	Uncharacterized protein.	0.992
A0A319AE73	A0A318ZN96	Paf1-domain-containing protein.	RNA polymerase II transcription elongation factor Rtf1p.	0.995