(10 nodes) RNA polymerase I complex network (Aspergillus saccharolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A318Z572	Uncharacterized protein. (478 aa)
	A0A318Z6M4	Uncharacterized protein. (497 aa)
	A0A318Z6Q8	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
	A0A318Z9R2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa)
	A0A318ZC31	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
	A0A318ZKY6	DNA-directed RNA polymerase I and III 14 kDa polypeptide. (137 aa)
	A0A318ZLE2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1677 aa)
	A0A318ZQ81	DNA-directed RNA polymerases I and III 40 kDa polypeptide. (374 aa)
	A0A318ZQR8	RNA polymerase I-specific transcription initiation factor RRN3 superfamily. (708 aa)
	A0A318ZZK5	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (235 aa)

Your Current Organism:

Aspergillus saccharolyticus

NCBI taxonomy Id: 1450539
Other names: A. saccharolyticus JOP 1030-1, Aspergillus saccharolyticus JOP 1030-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A318Z572	A0A318Z6M4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A318Z572	A0A318Z6Q8	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.997
A0A318Z572	A0A318Z9R2	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A318Z572	A0A318ZC31	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.997
A0A318Z572	A0A318ZKY6	Uncharacterized protein.	DNA-directed RNA polymerase I and III 14 kDa polypeptide.	0.998
A0A318Z572	A0A318ZLE2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
A0A318Z572	A0A318ZQ81	Uncharacterized protein.	DNA-directed RNA polymerases I and III 40 kDa polypeptide.	0.999
A0A318Z572	A0A318ZQR8	Uncharacterized protein.	RNA polymerase I-specific transcription initiation factor RRN3 superfamily.	0.997
A0A318Z572	A0A318ZZK5	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.998
A0A318Z6M4	A0A318Z572	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A318Z6M4	A0A318Z6Q8	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.993
A0A318Z6M4	A0A318Z9R2	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A318Z6M4	A0A318ZC31	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.998
A0A318Z6M4	A0A318ZKY6	Uncharacterized protein.	DNA-directed RNA polymerase I and III 14 kDa polypeptide.	0.990
A0A318Z6M4	A0A318ZLE2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A318Z6M4	A0A318ZQ81	Uncharacterized protein.	DNA-directed RNA polymerases I and III 40 kDa polypeptide.	0.999
A0A318Z6M4	A0A318ZQR8	Uncharacterized protein.	RNA polymerase I-specific transcription initiation factor RRN3 superfamily.	0.989
A0A318Z6M4	A0A318ZZK5	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.997
A0A318Z6Q8	A0A318Z572	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Uncharacterized protein.	0.997
A0A318Z6Q8	A0A318Z6M4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	Uncharacterized protein.	0.993