(5 nodes) Mixed, incl. SWAP/Surp, and U2 snRNP binding network (Aspergillus saccharolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A318ZF63	Surp module. (550 aa)
	A0A318ZFJ5	P-loop containing nucleoside triphosphate hydrolase protein. (1191 aa)
	A0A318ZH37	Splicing factor 3a, subunit 3. (504 aa)
	A0A318ZPT9	Matrin-type domain-containing protein. (238 aa)
	A0A319AE79	U2-associated snRNP A. (256 aa)

Your Current Organism:

Aspergillus saccharolyticus

NCBI taxonomy Id: 1450539
Other names: A. saccharolyticus JOP 1030-1, Aspergillus saccharolyticus JOP 1030-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A318ZF63	A0A318ZFJ5	Surp module.	P-loop containing nucleoside triphosphate hydrolase protein.	0.995
A0A318ZF63	A0A318ZH37	Surp module.	Splicing factor 3a, subunit 3.	0.998
A0A318ZF63	A0A318ZPT9	Surp module.	Matrin-type domain-containing protein.	0.998
A0A318ZF63	A0A319AE79	Surp module.	U2-associated snRNP A.	0.994
A0A318ZFJ5	A0A318ZF63	P-loop containing nucleoside triphosphate hydrolase protein.	Surp module.	0.995
A0A318ZFJ5	A0A318ZH37	P-loop containing nucleoside triphosphate hydrolase protein.	Splicing factor 3a, subunit 3.	0.994
A0A318ZFJ5	A0A318ZPT9	P-loop containing nucleoside triphosphate hydrolase protein.	Matrin-type domain-containing protein.	0.994
A0A318ZFJ5	A0A319AE79	P-loop containing nucleoside triphosphate hydrolase protein.	U2-associated snRNP A.	0.989
A0A318ZH37	A0A318ZF63	Splicing factor 3a, subunit 3.	Surp module.	0.998
A0A318ZH37	A0A318ZFJ5	Splicing factor 3a, subunit 3.	P-loop containing nucleoside triphosphate hydrolase protein.	0.994
A0A318ZH37	A0A318ZPT9	Splicing factor 3a, subunit 3.	Matrin-type domain-containing protein.	0.998
A0A318ZH37	A0A319AE79	Splicing factor 3a, subunit 3.	U2-associated snRNP A.	0.998
A0A318ZPT9	A0A318ZF63	Matrin-type domain-containing protein.	Surp module.	0.998
A0A318ZPT9	A0A318ZFJ5	Matrin-type domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.994
A0A318ZPT9	A0A318ZH37	Matrin-type domain-containing protein.	Splicing factor 3a, subunit 3.	0.998
A0A318ZPT9	A0A319AE79	Matrin-type domain-containing protein.	U2-associated snRNP A.	0.994
A0A319AE79	A0A318ZF63	U2-associated snRNP A.	Surp module.	0.994
A0A319AE79	A0A318ZFJ5	U2-associated snRNP A.	P-loop containing nucleoside triphosphate hydrolase protein.	0.989
A0A319AE79	A0A318ZH37	U2-associated snRNP A.	Splicing factor 3a, subunit 3.	0.998
A0A319AE79	A0A318ZPT9	U2-associated snRNP A.	Matrin-type domain-containing protein.	0.994