(16 nodes) snRNA metabolic process network (Aspergillus saccharolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A318Z1J9	Uncharacterized protein. (292 aa)
	A0A318Z1L7	Ribonuclease III. (351 aa)
	A0A318Z2N1	Uncharacterized protein. (280 aa)
	A0A318Z3J3	Putative exosome complex subunit Rrp46. (249 aa)
	A0A318Z706	Ribosomal protein S5 domain 2-like protein. (292 aa)
	A0A318Z8I7	Putative exosome complex exonuclease Rrp6. (789 aa)
	A0A318ZBQ9	RNase_PH domain-containing protein. (402 aa)
	USB1	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (310 aa)
	A0A318ZK74	Exonuclease. (762 aa)
	A0A318ZK94	rRNA pseudouridine synthase. (488 aa)
	A0A318ZPA7	L30e-like protein. (232 aa)
	A0A318ZR21	Exosome complex endonuclease 1/ribosomal RNA processing protein. (269 aa)
	A0A318ZS21	tRNA pseudouridine synthase D. (761 aa)
	A0A319A3R1	Uncharacterized protein. (629 aa)
	A0A319ADR8	ECR1_N domain-containing protein. (730 aa)
	A0A319AF14	Ribosomal protein S5 domain 2-like protein. (392 aa)

Your Current Organism:

Aspergillus saccharolyticus

NCBI taxonomy Id: 1450539
Other names: A. saccharolyticus JOP 1030-1, Aspergillus saccharolyticus JOP 1030-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A318Z2N1	A0A318Z3J3	Uncharacterized protein.	Putative exosome complex subunit Rrp46.	0.998
A0A318Z2N1	A0A318Z706	Uncharacterized protein.	Ribosomal protein S5 domain 2-like protein.	0.998
A0A318Z2N1	A0A318Z8I7	Uncharacterized protein.	Putative exosome complex exonuclease Rrp6.	0.442
A0A318Z2N1	A0A318ZBQ9	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
A0A318Z2N1	A0A318ZPA7	Uncharacterized protein.	L30e-like protein.	0.766
A0A318Z2N1	A0A318ZR21	Uncharacterized protein.	Exosome complex endonuclease 1/ribosomal RNA processing protein.	0.999
A0A318Z2N1	A0A319A3R1	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A318Z2N1	A0A319ADR8	Uncharacterized protein.	ECR1_N domain-containing protein.	0.999
A0A318Z2N1	A0A319AF14	Uncharacterized protein.	Ribosomal protein S5 domain 2-like protein.	0.999
A0A318Z3J3	A0A318Z2N1	Putative exosome complex subunit Rrp46.	Uncharacterized protein.	0.998
A0A318Z3J3	A0A318Z706	Putative exosome complex subunit Rrp46.	Ribosomal protein S5 domain 2-like protein.	0.998
A0A318Z3J3	A0A318ZBQ9	Putative exosome complex subunit Rrp46.	RNase_PH domain-containing protein.	0.999
A0A318Z3J3	A0A318ZK74	Putative exosome complex subunit Rrp46.	Exonuclease.	0.423
A0A318Z3J3	A0A318ZPA7	Putative exosome complex subunit Rrp46.	L30e-like protein.	0.858
A0A318Z3J3	A0A318ZR21	Putative exosome complex subunit Rrp46.	Exosome complex endonuclease 1/ribosomal RNA processing protein.	0.998
A0A318Z3J3	A0A319A3R1	Putative exosome complex subunit Rrp46.	Uncharacterized protein.	0.468
A0A318Z3J3	A0A319ADR8	Putative exosome complex subunit Rrp46.	ECR1_N domain-containing protein.	0.998
A0A318Z3J3	A0A319AF14	Putative exosome complex subunit Rrp46.	Ribosomal protein S5 domain 2-like protein.	0.998
A0A318Z706	A0A318Z2N1	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.998
A0A318Z706	A0A318Z3J3	Ribosomal protein S5 domain 2-like protein.	Putative exosome complex subunit Rrp46.	0.998