(6 nodes) Histidine catabolism network (Aspergillus saccharolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A318Z0Z1	Phenylalanine ammonia-lyase. (776 aa)
	NBP35	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily. (343 aa)
	A0A318ZE69	N2227-domain-containing protein. (423 aa)
	A0A318ZEQ0	Phenylalanine ammonia-lyase. (700 aa)
	A0A318ZIN0	Glutathione synthetase ATP-binding domain-like protein. (651 aa)
	CFD1	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily. (714 aa)

Your Current Organism:

Aspergillus saccharolyticus

NCBI taxonomy Id: 1450539
Other names: A. saccharolyticus JOP 1030-1, Aspergillus saccharolyticus JOP 1030-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A318Z0Z1	A0A318ZEQ0	A0A318Z0Z1	A0A318ZEQ0	Phenylalanine ammonia-lyase.	Phenylalanine ammonia-lyase.	0.710
A0A318Z0Z1	A0A318ZIN0	A0A318Z0Z1	A0A318ZIN0	Phenylalanine ammonia-lyase.	Glutathione synthetase ATP-binding domain-like protein.	0.515
A0A318Z0Z1	CFD1	A0A318Z0Z1	A0A318ZRL2	Phenylalanine ammonia-lyase.	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.	0.515
A0A318Z0Z1	NBP35	A0A318Z0Z1	A0A318ZCE8	Phenylalanine ammonia-lyase.	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.	0.515
A0A318ZE69	A0A318ZIN0	A0A318ZE69	A0A318ZIN0	N2227-domain-containing protein.	Glutathione synthetase ATP-binding domain-like protein.	0.631
A0A318ZE69	CFD1	A0A318ZE69	A0A318ZRL2	N2227-domain-containing protein.	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.	0.631
A0A318ZE69	NBP35	A0A318ZE69	A0A318ZCE8	N2227-domain-containing protein.	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.	0.631
A0A318ZEQ0	A0A318Z0Z1	A0A318ZEQ0	A0A318Z0Z1	Phenylalanine ammonia-lyase.	Phenylalanine ammonia-lyase.	0.710
A0A318ZEQ0	A0A318ZIN0	A0A318ZEQ0	A0A318ZIN0	Phenylalanine ammonia-lyase.	Glutathione synthetase ATP-binding domain-like protein.	0.515
A0A318ZEQ0	CFD1	A0A318ZEQ0	A0A318ZRL2	Phenylalanine ammonia-lyase.	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.	0.515
A0A318ZEQ0	NBP35	A0A318ZEQ0	A0A318ZCE8	Phenylalanine ammonia-lyase.	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.	0.515
A0A318ZIN0	A0A318Z0Z1	A0A318ZIN0	A0A318Z0Z1	Glutathione synthetase ATP-binding domain-like protein.	Phenylalanine ammonia-lyase.	0.515
A0A318ZIN0	A0A318ZE69	A0A318ZIN0	A0A318ZE69	Glutathione synthetase ATP-binding domain-like protein.	N2227-domain-containing protein.	0.631
A0A318ZIN0	A0A318ZEQ0	A0A318ZIN0	A0A318ZEQ0	Glutathione synthetase ATP-binding domain-like protein.	Phenylalanine ammonia-lyase.	0.515
CFD1	A0A318Z0Z1	A0A318ZRL2	A0A318Z0Z1	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.	Phenylalanine ammonia-lyase.	0.515
CFD1	A0A318ZE69	A0A318ZRL2	A0A318ZE69	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.	N2227-domain-containing protein.	0.631
CFD1	A0A318ZEQ0	A0A318ZRL2	A0A318ZEQ0	Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.	Phenylalanine ammonia-lyase.	0.515
NBP35	A0A318Z0Z1	A0A318ZCE8	A0A318Z0Z1	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.	Phenylalanine ammonia-lyase.	0.515
NBP35	A0A318ZE69	A0A318ZCE8	A0A318ZE69	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.	N2227-domain-containing protein.	0.631
NBP35	A0A318ZEQ0	A0A318ZCE8	A0A318ZEQ0	Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.	Phenylalanine ammonia-lyase.	0.515