(12 nodes) Two-component regulatory system, and DNA binding HTH domain, Fis-type network (Aneurinibacillus sp. XH2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMA73007.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (726 aa)
	AMA73008.1	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	AMA73397.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (466 aa)
	AMA73398.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	AMA74745.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
	AMA73625.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	AMA73628.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
	AMA73629.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	AMA73722.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (310 aa)
	AMA73723.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
	AMA73724.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (639 aa)
	AMA73726.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (178 aa)

Your Current Organism:

Aneurinibacillus sp. XH2

NCBI taxonomy Id: 1450761
Other names: A. sp. XH2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMA73007.1	AMA73008.1	ACH33_09140	ACH33_09145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
AMA73007.1	AMA73397.1	ACH33_09140	ACH33_11390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.476
AMA73007.1	AMA73398.1	ACH33_09140	ACH33_11395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
AMA73007.1	AMA73625.1	ACH33_09140	ACH33_12670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AMA73007.1	AMA73628.1	ACH33_09140	ACH33_12685	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.522
AMA73007.1	AMA73629.1	ACH33_09140	ACH33_12690	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
AMA73007.1	AMA73722.1	ACH33_09140	ACH33_13205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.465
AMA73007.1	AMA73723.1	ACH33_09140	ACH33_13210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
AMA73007.1	AMA73724.1	ACH33_09140	ACH33_13215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.482
AMA73007.1	AMA73726.1	ACH33_09140	ACH33_13225	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AMA73007.1	AMA74745.1	ACH33_09140	ACH33_12665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.506
AMA73008.1	AMA73007.1	ACH33_09145	ACH33_09140	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.964
AMA73008.1	AMA73397.1	ACH33_09145	ACH33_11390	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.860
AMA73008.1	AMA73628.1	ACH33_09145	ACH33_12685	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AMA73008.1	AMA73722.1	ACH33_09145	ACH33_13205	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.831
AMA73008.1	AMA73723.1	ACH33_09145	ACH33_13210	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AMA73008.1	AMA73724.1	ACH33_09145	ACH33_13215	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.821
AMA73008.1	AMA74745.1	ACH33_09145	ACH33_12665	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
AMA73397.1	AMA73007.1	ACH33_11390	ACH33_09140	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.476
AMA73397.1	AMA73008.1	ACH33_11390	ACH33_09145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860