STRINGSTRING
AJF84990.1 AJF84990.1 fabD-3 fabD-3 acpK acpK pksF pksF pksG pksG AJF84994.1 AJF84994.1 AJF84995.1 AJF84995.1 pksN pksN fabF-2 fabF-2 pksM pksM pksN-2 pksN-2 pksR pksR AJF85061.1 AJF85061.1 ppsE ppsE dltA dltA srfAA srfAA dltA-2 dltA-2 ppsA ppsA dltA-3 dltA-3 dltA-4 dltA-4 AJF85153.1 AJF85153.1 AJF86270.1 AJF86270.1 dhbF dhbF dhbB dhbB entE entE dhbC dhbC AJF86275.1 AJF86275.1 besA besA dltA-7 dltA-7 srfAC srfAC srfAD srfAD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJF84990.1Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
fabD-3Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (787 aa)
acpKPoly(3-hydroxyalkanoate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)
pksFPolyketide beta-ketoacyl:ACP synthase; Involved in polyketide production; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (415 aa)
pksG3-hydroxy-3-methylglutaryl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
AJF84994.1Polyketide biosynthesis enoyl-CoA hydratase; Involved in polyketide synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
AJF84995.1Polyketide biosynthesis enoyl-CoA hydratase; Involved in polyketide production; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (248 aa)
pksNPolyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (5060 aa)
fabF-2Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (4605 aa)
pksMPolyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (4323 aa)
pksN-2Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (5517 aa)
pksRPolyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2574 aa)
AJF85061.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
ppsEATP-dependent isoleucine adenylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family. (1275 aa)
dltAPeptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3610 aa)
srfAAPeptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2552 aa)
dltA-2Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2577 aa)
ppsAPeptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2560 aa)
dltA-3Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2602 aa)
dltA-4Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (5363 aa)
AJF85153.1Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3980 aa)
AJF86270.1Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
dhbFDiguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2394 aa)
dhbBIsochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
entEEnterobactin synthase subunit E; Bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
dhbCSynthesizes isochorismate from chorismate as part of the biosynthesis of the siderophore 2,3-dihydroxybenzoate; can also be used in menaquinone synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
AJF86275.12,3-dihydroxybenzoate-2,3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)
besAEnterobactin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
dltA-7Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3590 aa)
srfACPeptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1276 aa)
srfADThioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
Your Current Organism:
Bacillus atrophaeus
NCBI taxonomy Id: 1452
Other names: ATCC 49337, B. atrophaeus, Bacillus atriphaeus, Bacillus sp. S2 BC-2, Bacillus subtilis DSM 2277, Bacillus subtilis DSM 675, CCUG 28524, CIP 107159, DSM 7264, IFO 15539, JCM 9070, LMG 16797, LMG:16797, NBRC 15539, NRRL NRS-213
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