STRINGSTRING
pksN-2 pksN-2 dltA-4 dltA-4 AJF86270.1 AJF86270.1 dhbF dhbF srfAC srfAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pksN-2Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (5517 aa)
dltA-4Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (5363 aa)
AJF86270.1Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
dhbFDiguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2394 aa)
srfACPeptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1276 aa)
Your Current Organism:
Bacillus atrophaeus
NCBI taxonomy Id: 1452
Other names: ATCC 49337, B. atrophaeus, Bacillus atriphaeus, Bacillus sp. S2 BC-2, Bacillus subtilis DSM 2277, Bacillus subtilis DSM 675, CCUG 28524, CIP 107159, DSM 7264, IFO 15539, JCM 9070, LMG 16797, LMG:16797, NBRC 15539, NRRL NRS-213
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