STRINGSTRING
gutB gutB gph gph frk1 frk1 AJF83962.1 AJF83962.1 AJF87677.1 AJF87677.1 phy phy AJF85491.1 AJF85491.1 AJF87286.1 AJF87286.1 AJF87287.1 AJF87287.1 AJF87288.1 AJF87288.1 AJF87289.1 AJF87289.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gutBAlcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
gphMajor facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
frk1Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
AJF83962.1Butanediol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
AJF87677.1Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
phy3-phytase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
AJF85491.1Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
AJF87286.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
AJF87287.14-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (422 aa)
AJF87288.1Inorganic polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
AJF87289.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
Your Current Organism:
Bacillus atrophaeus
NCBI taxonomy Id: 1452
Other names: ATCC 49337, B. atrophaeus, Bacillus atriphaeus, Bacillus sp. S2 BC-2, Bacillus subtilis DSM 2277, Bacillus subtilis DSM 675, CCUG 28524, CIP 107159, DSM 7264, IFO 15539, JCM 9070, LMG 16797, LMG:16797, NBRC 15539, NRRL NRS-213
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