STRINGSTRING
AJF85739.1 AJF85739.1 ysxE ysxE spoVID spoVID gerM gerM yutH yutH AJF87138.1 AJF87138.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJF85739.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ysxEHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
spoVIDHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (861 aa)
gerMSporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
yutHEndospore coat-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
AJF87138.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
Your Current Organism:
Bacillus atrophaeus
NCBI taxonomy Id: 1452
Other names: ATCC 49337, B. atrophaeus, Bacillus atriphaeus, Bacillus sp. S2 BC-2, Bacillus subtilis DSM 2277, Bacillus subtilis DSM 675, CCUG 28524, CIP 107159, DSM 7264, IFO 15539, JCM 9070, LMG 16797, LMG:16797, NBRC 15539, NRRL NRS-213
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